Chitinophaga filiformis: MYF79_17285
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Entry
MYF79_17285 CDS
T08225
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil00040
Pentose and glucuronate interconversions
cfil01100
Metabolic pathways
cfil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
MYF79_17285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MYF79_17285
Enzymes [BR:
cfil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
MYF79_17285
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
UPK66691
UniProt:
A0ABY4HW94
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Position
complement(4355735..4356853)
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AA seq
372 aa
AA seq
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MRTNSLRNAGITVLMTFIFAACNKNETKDTSIANTDTAAATSDVVAVAATCTAQAWASVN
GGTTGGDTAKPTVVSTYDALKAAIQNTGIKVIQVNGTITIPSGGRISFQDQAGKTIFGSP
GATLASTDQTKDKSGIIYVKRCKNIIIRNLIFDGPGAYDVDGWDNATLDACTNIWVDHCE
FRDGLDGNFDIKNTSDYITVSNCKFTYLKAPKAGGPGGSDDHRFSDLIGSSDGATADRGH
FRITFVRCWWAQGCVARMPRVRFGQVHIVNNYFSSTDSKSCIQAGFEANLLIESNVFENV
KNPIDLMDKTSSAVQLRGNAFNNTSGTTSGNGVTAFVPPYTIPILDTAIVKSTVTGHKGA
GATLAGNSCSSL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaattctttgcgcaatgcagggataactgttttaatgacatttatttttgct
gcttgtaacaaaaacgaaacaaaagacaccagcatagcaaataccgatactgccgccgcg
acaagcgatgtagtagctgttgctgcaacatgcacagcacaggcatgggcatctgtgaat
ggaggcactaccggtggagacacggcaaaacctaccgttgtttctacatatgatgcatta
aaagccgctattcaaaatacaggcattaaggtaatacaggtgaacggcaccattaccatc
ccatcaggaggccggatctccttccaggaccaggcaggcaaaaccatctttggcagtccc
ggtgctactttagcatcgactgatcaaaccaaggacaagtcaggcattatctatgtaaag
agatgtaaaaacatcattatccgcaacctcatttttgatggtccgggcgcatatgatgtg
gatggctgggataatgccacactggatgcatgtaccaacatatgggtagaccattgcgaa
ttcagagatggattggatggcaactttgacattaagaacacatccgactatatcactgtc
tctaattgtaaattcacttacttaaaggcaccaaaagctggtggtcccggcggttctgac
gaccacaggttttcagacctgatcggctccagcgacggcgccacggccgacagaggccat
ttccgcatcacttttgtaagatgctggtgggcacagggctgtgttgccagaatgccacgg
gtgcgttttggacaggtacacattgtcaacaactacttcagcagtaccgacagcaagagc
tgcatccaggcgggttttgaagcgaacctgttgatagagtccaacgtttttgagaacgtg
aagaacccaatcgacctgatggataagacttccagtgcggtgcaactgagaggcaatgct
ttcaacaacacatcaggtacgacttcaggcaatggcgtgaccgcattcgttcctccttat
accattcccatactcgatacggcaattgtaaaatcaactgtaacagggcacaaaggcgcc
ggagccactttagcgggtaacagctgctcatccctatag
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