Chitinophaga filiformis: MYF79_20400
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Entry
MYF79_20400 CDS
T08225
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_20400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_20400
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_40
Sigma70_ECF
GerE
HTH_5
SHS2_Rpb7-N
HTH_24
HTH_23
TSNAXIP1_N
Motif
Other DBs
NCBI-ProteinID:
UPK67304
LinkDB
All DBs
Position
5267646..5268224
Genome browser
AA seq
192 aa
AA seq
DB search
MQKLTCERERELLNALTLDDEQAFAVLFHNYKNKIYGFILGITSSEEISKDIVQDVFLKI
WKMRHRASEIENFNALIYRMARNAALDHLKRASRESTVLSHLSVLSKEATAHDPFEDIKA
AEIKTKYENALQRLPKQQRLVYELKHLQGIEYPEIAKKLRLSVPTIRSHFRNALNALKSN
LFLTLFIIITRF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcttacatgtgaaagggagcgggaattacttaatgcgcttacacttgacgat
gagcaggcattcgctgtactttttcacaactataaaaataagatctacggtttcatcctg
gggatcacctcctcagaagaaatttcgaaagacatcgtccaggacgtttttttgaaaata
tggaaaatgcgccatcgtgccagcgaaattgaaaactttaatgccttaatttatcgtatg
gcaaggaatgctgcgcttgatcatctgaagcgggcttcacgcgagtctacggtgctttca
catctaagtgtgctctcaaaagaagctactgcccatgatcctttcgaggatatcaaggct
gcagaaattaaaacaaaatacgaaaacgctttacaaagattacccaaacaacaacggctg
gtttatgaactaaaacatcttcaagggattgaatacccggagattgctaaaaaactgcgt
ctttctgttcctaccataagaagccacttcagaaatgccctgaatgccttaaaatccaac
ctctttctgaccctgttcattataattacccgcttttaa
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