Chitinophaga filiformis: MYF79_20600
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Entry
MYF79_20600 CDS
T08225
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfil03000
]
MYF79_20600
Transcription factors [BR:
cfil03000
]
Prokaryotic type
Helix-turn-helix
Other families
MYF79_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
HTH_8
AAA_2
AAA
AAA_3
AAA_16
AAA_19
DUF6096
Motif
Other DBs
NCBI-ProteinID:
UPK67344
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Position
5306397..5308313
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AA seq
638 aa
AA seq
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MKEHVLIVEDEYILANDLRLLLEQAGHKVCAIADTLEDAREAVLKYRPSWVLLDILLQDN
AMGTDLARFLTEQGVGFIYISASTDQHILEIAKQTQPDGFLVKPVRERDLLMMLDIARSK
HIQHQEIASQRKLSVHNQLQQLVDGDLPLEQILARMPGIFQSLVPFDFMCYEFLYPGTHL
TKSKSFLRIGFHEYQLIGKEELNSMLGKGRSLQRQSMLPRNVAGDIYNHAAFSHLIEREG
LERLLHQRFGINSCLQFCLSLGKINVQLAFYHKQPDMYKPMHLSLPADAQKDLTALFNKI
QLADSSFAVCTKKQVAPLPKPAQQHPEGMLGNSPAFLRVLDDIETVANTPVSVLILGESG
TGKELAARSIHQLSSRQHQPFVVVNCATLPAELIESELFGHEKGAFTGAIDKRMGKFELA
NGGTLFLDEIGEMPLPLQAKLLRVLQERELEHVGGNKVVKVDVRVLAATNKHLEEEVAEG
RFRLDLFFRLNVFPMTLPPLRDRKEDIPILCKAFLEQSAARLGSLPVPVLSAEALCILQA
YEWPGNIRELENLIERIVIRCRKPVVGKADLPELKNKMLPDTAADQTLSQKEAAHIIAVL
RKCNGRVSGPRGAAAILGLHPSTLSSRIKKLGIKKKIM
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacatgtgttaattgtagaagatgaatatatactggccaatgatctgcggctc
ttgttagaacaggcaggccataaggtctgcgcaattgcagatacgctggaagatgcgagg
gaagcggttttaaaatatcgcccctcctgggtgctgctggacatcctgctacaggacaat
gcaatgggtacagacctggccaggttcctgaccgagcagggtgtcggcttcatatacatt
tccgccagcacagatcagcacattcttgagatagccaaacaaacgcagcctgatggtttc
ctggtaaagcccgtgcgggaacgggacctgctgatgatgctggacattgcccgcagtaaa
catatccaacaccaggaaatagcatcgcaacgaaagctgtcggtacataaccagctacaa
caacttgtagatggggaccttcccctggaacagatcttagcacgtatgcccggcattttt
caatcacttgtgccattcgattttatgtgctatgaattcctgtatcccggaacacacctt
acaaaaagcaaaagttttctaaggattggctttcatgaataccagttaatcggaaaggag
gaactgaactcgatgctcggaaagggccggtccctgcaaaggcaatctatgttaccacgc
aatgtagccggtgatatttacaaccatgctgctttcagtcacttaatcgaaagagaaggc
ctggaacgtctgctgcatcagcgttttggcatcaattcctgcctgcaattctgcctttca
ttaggcaagatcaatgtccagcttgcgttttatcataagcagccggatatgtacaagcct
atgcacttgtcactgccggcggacgcacaaaaagatctgacagcattatttaataagatt
cagttagcagacagcagttttgctgtctgcactaaaaaacaggtagctccattgccgaaa
ccggcacagcagcatccggaaggcatgctgggcaatagtcctgccttcctgcgggtactc
gacgatatagagacagtggccaacacaccggtatctgtgctcatccttggcgagagtggt
accggcaaggaactggcggccagaagtattcaccagctttcttcgagacagcaccagcca
tttgtagtagtgaattgtgcaacactgccggcagaattaattgaatcggaattgttcggt
cacgagaagggcgcttttacgggtgctattgataagcgaatgggcaaatttgaattggca
aacggcggtacgctgttcctggatgaaatcggggaaatgcccctccccttgcaggccaag
ctgttgcgtgtgttgcaggaaagagaactggaacatgtaggcggcaataaagtagtgaag
gtggacgtgcgcgtacttgcggctaccaacaaacacctggaagaggaagtagcagaaggc
cggtttcgcctcgacctgttcttccgcctgaatgtattcccgatgaccttacctcctttg
cgcgatagaaaagaggatataccgattctttgcaaggcatttctggaacagagcgcagcg
cggctggggagcttaccagtaccggttctgagtgcggaagcgctttgtatactgcaggct
tatgaatggccggggaatatccgggagttggaaaatttgatagaacgcatagtgatcaga
tgccgaaaacccgtggtcggtaaagcagatttacccgaactgaaaaataagatgctgcca
gataccgccgcagatcaaacactttcgcagaaagaagcagcacatattattgccgtgctc
agaaaatgtaatggcagagtgtccggcccccgaggcgcagcggcaatccttggacttcac
cccagcaccctcagctcccgcatcaaaaagctgggtattaaaaagaaaataatgtaa
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