Chitinophaga filiformis: MYF79_22150
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Entry
MYF79_22150 CDS
T08225
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_22150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_22150
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_22150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
GMT-wHTH
HTH_10
HTH_24
GEMIN8
Motif
Other DBs
NCBI-ProteinID:
UPK67653
UniProt:
A0ABY4HV38
LinkDB
All DBs
Position
complement(5723360..5723908)
Genome browser
AA seq
182 aa
AA seq
DB search
MSYSILEDNELMDKVRLSDGKAFDEIYRRYWRKLYALSLYHLRDSNAAEDIVQEIFASLW
ASRERSEIKHLYTYLATATKYSVFHYFAQPARNTGSLEELHALAAEQSTADSRLLEEEIR
REIDRLPEKCRLVFRYSREEGLANKIISEKLNISTKAVEKHMTRALRQLRVQFKHMLMSL
LF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacagcatattggaggacaatgaattaatggacaaggtcaggctttctgacggg
aaggcctttgacgagatttatcgccgctactggcgtaaattatacgctttatccttgtac
catctgagagacagcaacgctgctgaagatatagtacaggagatctttgcgagcctctgg
gcctcccgcgaaagatctgagatcaaacatttatatacctacctggctacagccaccaaa
tattccgttttccattactttgcccagccggccaggaacacaggatccctggaagaactg
catgccctggcggcagaacagagcacggcggattcccgcctgctggaagaagagatccgg
cgtgaaatagaccggctgcccgagaagtgcaggctggtattccgttacagccgggaagag
gggctggccaataaaataatatctgaaaagctgaatatctcgaccaaagctgtagaaaag
catatgacccgggcactccgccagttaagggtacagtttaaacacatgttgatgtcatta
ttgttctga
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integrated database retrieval system
