Chitinophaga filiformis: MYF79_22275
Help
Entry
MYF79_22275 CDS
T08225
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfil03009
]
MYF79_22275 (rimO)
Enzymes [BR:
cfil01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MYF79_22275 (rimO)
Ribosome biogenesis [BR:
cfil03009
]
Prokaryotic type
ribosomal protein modification factors
MYF79_22275 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Oxidored_nitro
CDT1_C
Motif
Other DBs
NCBI-ProteinID:
UPK67678
UniProt:
A0ABY4HW43
LinkDB
All DBs
Position
complement(5755856..5757163)
Genome browser
AA seq
435 aa
AA seq
DB search
MKTKTLKKDKVNIITLGCSKNMVDSEVLSGQLLANDIDVVHENAKKDHNIVVVNTCGFID
KAKEESINTILEQVELKNRGRLEKVYVTGCLSERYRGDLESEIPGVDAWFGTMELPLILK
KFDADYKAELIGERLLATPTHYAYLKIAEGCNRTCSFCAIPLMRGGHVSRPIEQLVAEAE
KLVNSGVKEIMLIAQELTYYGLDLYKQRRLADLLRALANVKGLEWIRLHYAYPHKFPMEV
LDVMNEFPNICNYIDMPLQHAADNMLKSMKRQITRVEMEELVTAIREKVPGICLRTTLIT
GYPGETLEDVEELKAFLEKMRFDRVGVFTYSHEEGTSAYELEDNIPAEEKERRAQEIMEV
QQEISLEKNQEKVGKVFRVIVDKKESGRYLARTEFDSVEVDNEVIINTSKRLKPGDFVNV
RITRAYDYDLEGELV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacaaaaactttaaagaaagataaggttaatattattacgcttggctgttccaag
aatatggttgattccgaggtgctcagtggtcagttattggccaacgacatcgatgtagtg
catgaaaatgccaaaaaggaccataatatcgttgttgtaaatacctgcggttttattgat
aaggccaaagaggaatctatcaacaccatcctggagcaggttgaattaaagaatcgcgga
cgcctggaaaaagtatatgttacgggctgtctgagtgaacgttaccgcggagacctggaa
tcggaaatacctggcgtggatgcctggtttggtaccatggagctgccactgatcctcaag
aaattcgatgccgactataaagcggagctgatcggcgaacgtttgctggctactccgaca
cactatgcttacctgaaaatagctgaaggctgtaaccgtacctgttcattctgcgctatt
ccgctgatgagaggcgggcacgtatccaggcctattgagcaactggtggctgaagcggag
aaactggtgaattcaggtgtgaaagagatcatgctgattgcgcaggaactgacctattat
ggcctggacctgtacaaacaacgccggctggcagaccttttaagggcgctggcaaatgta
aaggggctggagtggatacgcctgcattatgcttacccgcacaaatttccgatggaagtg
ctggacgtaatgaatgaattccccaatatttgtaactatattgacatgccgttgcaacat
gcggctgataatatgctgaaatccatgaagcgccagatcacccgcgtggaaatggaggaa
cttgttactgctatccgcgaaaaagtacctggcatctgtctgcgtaccacgctgatcacc
ggttatcccggagagacgctggaagacgtggaagaactgaaggccttcctcgaaaagatg
cgctttgacagggtgggcgtatttacatacagtcatgaagagggcaccagcgcctacgag
ctggaagacaatatccctgcagaggaaaaggaacgcagggcgcaggagatcatggaagta
cagcaggaaatttcccttgagaagaaccaggaaaaagttggcaaggttttccgtgtgatc
gtagacaaaaaagaatcaggccgttacctggcacgtacagagttcgactctgttgaagtg
gataatgaagtgatcattaataccagcaaacgtctgaaacccggcgattttgtcaatgta
aggatcaccagggcatatgattatgacctggaaggtgaactggtataa
DBGET
integrated database retrieval system
