Chitinophaga filiformis: MYF79_23005
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Entry
MYF79_23005 CDS
T08225
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_23005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_23005
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_23005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_40
Sigma70_ECF
HTH_24
HTH_23
HTH_11
PF0610-like_N
Med15_N
Tup_N
Motif
Other DBs
NCBI-ProteinID:
UPK67823
UniProt:
A0ABY4HXY6
LinkDB
All DBs
Position
complement(5939415..5939969)
Genome browser
AA seq
184 aa
AA seq
DB search
MNTIAALKQGNLLVFNEVYYSWHKRIYYFILQKTRSSFIAEEVTQLAFIKCWNYRENLAD
DLDISVQLFRIARTTLIDFLRKETVYKEKVIHVIDEYTLPVDDLWGKLAEKELQAKLANA
LKEMPPMRRKVFEMSRFKGMSHRQIAQELSLSSRTVEAHIFQAIKQIKHYLGLIVSLLAW
FGRF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgaatactatcgctgctttgaagcaaggtaacctgctggtatttaatgaggtctattat
tcctggcacaaaaggatctactattttattctccagaaaacaaggtcatccttcattgcg
gaagaggtgacgcagctggcattcatcaagtgctggaactacagggaaaacctcgcagat
gacctcgatatatccgtgcagctattccgcattgcccgcaccacgctgatcgactttctc
cgcaaggaaaccgtttacaaggaaaaagtaatccacgtaatagacgagtataccctgccg
gtagacgacctatggggcaagctggcggaaaaagaactacaggcgaagctggcgaatgca
ctgaaagaaatgcctccgatgcgtcgtaaagtgttcgaaatgagtcggtttaaaggcatg
agccaccggcagatcgcgcaggaactttccttgtcatccagaacagtggaagcacatatt
ttccaggccatcaaacagataaaacattatctcgggctcatcgtctctctcctggcctgg
ttcggacggttttaa
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