Chitinophaga filiformis: MYF79_23010
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Entry
MYF79_23010 CDS
T08225
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_23010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_23010
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_23010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_Tnp_ISL3
HTH_11
HTH_23
HTH_24
HTH_38
HTH_40
GerE
HTH_AsnC-type
Sigma70_ECF
HTH_7
UPF0122
ARM_SRB8
MarR_2
HTH_20
HTH_28
HTH_29
PF0610-like_N
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
UPK67824
UniProt:
A0ABY4HXD3
LinkDB
All DBs
Position
complement(5940432..5941025)
Genome browser
AA seq
197 aa
AA seq
DB search
MFETHISDGDLLQLLKGDDTAAFEMLYNRYWKALYTRACQRVDVNDAKDLVQEVMLSLWR
RRKEIPVFKEGEFAKYLHAAIKYRVISHYAFSAAEIKKISLFDILDSQEFNDRLETKELS
ANIAAAVSLLPTRMQQIFRMSREEDLPIAEIARRLNLSEQTVKNQLTEALRRVRGYLRSS
SSGDWALLVAYLFCHVR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaacgcatatcagtgacggggacctgctgcaattgctgaaaggagatgataca
gctgctttcgagatgctgtataacaggtattggaaagcattatatacgcgggcctgtcag
cgggtggacgtcaatgatgcgaaagacctggtacaggaagtcatgctgagcctctggcgc
agaagaaaagagatccccgtttttaaggaaggtgaattcgcaaaatacctgcatgctgct
attaaatacagggtgatcagtcactatgccttcagtgcagcagagatcaaaaaaatatcc
ttattcgacatactggacagccaggaattcaatgacaggctggaaaccaaagaactgagt
gccaatattgccgctgccgtcagcctgttacccacccgtatgcagcagatcttccggatg
agccgggaagaagaccttcctatcgcagaaatagccaggcggctcaacctgtcggagcaa
acggttaaaaaccagctgacagaagcgcttcgcagggtgcgggggtacctgagatccagt
tcctcgggagactgggccctgctggtggcttatctcttttgtcatgtgagatag
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