Chitinophaga filiformis: MYF79_24185
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Entry
MYF79_24185 CDS
T08225
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfil02000
]
MYF79_24185
Transporters [BR:
cfil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MYF79_24185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_2
TPR_16
TPR_12
Motif
Other DBs
NCBI-ProteinID:
UPK68055
LinkDB
All DBs
Position
complement(6250138..6251538)
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AA seq
466 aa
AA seq
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MNIKGTIKIHVIFTLALLILSSCKKEDKFLDVKPQDKLFTISTLRDCEYLLQNERIFNYF
QPTLGKASTDEYFVSESDLINLEPIYQNIYVWAKKIYSPGANDANWSDAYSRVYYANTIL
DALKLLHIEAEDSKRVERIRAMALFYRSYAFNSLMQIFTTPYDSATASTALGIPLKLNSN
MNEIPQRSSQQECYRQIISDVLSTLMHLPIKADYITLPSQNAAYGFLARVCLAIGNYTDA
RLYANSALNINDTLFDYNLAEPGPAFYYFMSLSQYPVPEDIFHTIFLGDPLSSSVTRTIV
DSSLYNSYEENDLRKSMFFMDYLGQKRFKGSYEFKMVLSQYEGIANDELYLIRGECAARM
GDVESAISDLNKLLVKRYKKGTYIIKVTKDPLEALKLILEERRKEMPFRGTRWTDLRRLN
KDPRFSVTLKRIVNGTKYILTPNDSRYAMPIPDNEIELSGIQQNNR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaaggcaccataaagatacacgtgattttcactctagctctattaatacta
tcatcatgtaaaaaagaggacaagtttcttgacgtaaagccacaggacaaactcttcact
atctcaacgctgagagattgtgagtatcttttacagaatgaacgcatatttaattacttt
cagcccactcttggtaaggcatctactgatgagtattttgttagtgaaagtgatttgatt
aatttggaacctatctaccaaaacatttatgtttgggcaaaaaaaatatatagtccaggg
gcaaacgacgcgaattggtccgatgcctactcgagagtgtattacgccaacactatactg
gatgctttgaagttactacatatcgaagcggaagattcgaaacgggttgaaagaatcagg
gcaatggctctgttttacagatcctatgcctttaatagtttaatgcagatatttacgact
ccatatgattctgcaacagcatcgacggcattagggattcccctgaagttaaactcgaat
atgaatgaaattccccaacgttcatcgcagcaagaatgttacaggcaaattatttctgat
gtattgtctactttaatgcatttgcctatcaaagcggactatataaccctgccaagtcaa
aatgccgcatatggcttcctcgctcgtgtttgtcttgccataggaaattatactgatgct
agattatatgcaaactcggcactcaatataaatgatactctgtttgattataatttggct
gaacctggccccgcattctactactttatgagcctatcacagtatccagtaccagaggat
atctttcatacaatatttcttggagatcccctaagcagttctgttacgagaacaattgtt
gattcttctttatacaactcatatgaagaaaatgatttaaggaaatcgatgttcttcatg
gactacttgggccaaaaaaggttcaaaggatcttatgaattcaaaatggttcttagtcag
tatgaaggaattgccaacgacgagctttatttaattaggggcgaatgtgcagcaagaatg
ggagatgttgagagtgcaataagtgatttaaacaaattattggtgaagcgctataagaaa
ggtacatacattattaaggtgacaaaagatccactggaggccttaaaacttattttggaa
gaaagaaggaaagaaatgccatttagaggtacgcgatggacggacctaagacgacttaat
aaagatccaagattttccgtgacactaaagagaattgttaacgggacaaagtacatactt
acaccaaacgattcccgatatgcaatgccaatccccgacaatgaaatagaattgagcgga
atacaacaaaataatagataa
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