Chitinophaga filiformis: MYF79_25895
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Entry
MYF79_25895 CDS
T08225
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MYF79_25895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_25895
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MYF79_25895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
DivIVA
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UPK68392
LinkDB
All DBs
Position
complement(6658054..6660177)
Genome browser
AA seq
707 aa
AA seq
DB search
MKYFPDSALVQLEFDKVQALLKEHCKTELGKQMADDLRLHTHIDYVRTALQQAHEYKQLT
LLQEHFPNDYVLNLKNELRMLGIQGAVLSGEQIMLLRKLAESMHSIVRFFDHDRRVQYAG
LFSVITHTHYEKKITALIDEVLDENGDVRDNATPELAKIRMSLFRKRNELRRAFDRVLSK
LSKLGYLADTEEAFLNGRRVVAVYAENKRMVKGIQHGESDTRRTTFIEPEETIELNNDVM
SLEREESKEVYKILRTLTAALSQHAQLLNNYHEILGLYDFIRAKAKLALDMDGNYPMLSP
HAQLHLVEAYHPLLLLYNRRNQKPTIPVNLTLDKDNHILVISGPNAGGKTVTMKTVGLIQ
LMLQAGLLVPVHPSSQLGIFRQLMIHIGDTQSLEFELSTYSSHLRNMKYFMENANGKTLF
FIDELGSGSDPNLGGAFAEVIMEEMAKKHAFGIVTTHYLNLKVMANKVKGIINGAMGFDE
ENLLPMYKLIVGKPGSSYTFSIAQRIGLHPALISRAKNLVDEGHFQLDKLLNKAEQDLQK
IEAKEKELQKLLKENEKLKREYEILSDKERKTQQFTTLKLQNKIKEEELQYLKDMERKMK
QIVIEWKRTDDKQKVLKQAEALLFRKKEKQINERFEKKVQEKFLEVVGGDLKLGDQVKIK
SNGQVGKLMEIRDKRGIVKLGNIPMNVPMADLVLVKERPKEAKETAK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattttcccgattcagcactggttcagctggaatttgacaaggtacaggctttg
ttaaaggagcattgtaaaaccgagttgggtaaacagatggcagatgacctgcgtttgcac
acccatattgattacgtcagaacggcccttcaacaggcccatgaatacaagcagcttact
ttgctgcaggagcattttcccaacgattatgtactgaacctgaaaaatgagcttcggatg
ctgggcattcagggtgcggtactcagtggagaacagatcatgctgctgcgcaaactggca
gaaagtatgcacagtatcgtacgtttctttgatcacgacaggcgcgtacagtacgccggc
ttgttcagcgtgatcacgcatacccactatgaaaagaagatcactgccctgattgacgaa
gtgctcgacgagaacggagatgtgcgcgataatgccactcccgaactggcgaagatccgt
atgagcctcttccgtaaaaggaatgaactgcgccgcgcattcgaccgtgtgctcagtaaa
ctcagcaaactgggttacctggccgataccgaggaggccttcctcaatggcagaagggta
gtggccgtctacgctgaaaacaagcgtatggtgaaaggtatccagcacggagagtctgat
acccgccgtactactttcatagagccggaagaaacgattgagctgaacaacgacgtaatg
tcccttgaaagagaggaaagcaaggaggtctacaagatcctgcgtacactgactgctgca
ctcagccagcatgcacagctgctcaacaattatcacgagatcctcggactgtacgacttt
atcagggcaaaggccaaactggcgctggacatggacggtaattaccccatgctctcgccg
catgcgcaactgcacctggtagaagcctatcaccccctgctgttgttatacaaccgtcgt
aatcagaaaccgactatcccggtgaacctcaccctggacaaggacaaccatatcctggtg
atcagtggtcctaacgccggtggtaaaacggtcaccatgaaaacggtgggcctgatccag
cttatgttgcaggccggcctgctggtgccggtacatcccagctcacaactaggcatcttc
cggcagctgatgatccacatcggtgacacgcagtcgctggagtttgaattgagtacatac
agctcccacctgaggaacatgaaatatttcatggaaaatgccaatggcaagaccctgttc
tttatcgatgaactgggaagtggttccgaccctaacctggggggcgcctttgctgaggtg
atcatggaggaaatggccaagaaacacgcttttgggatcgtaaccacccactatctgaac
ctgaaggtcatggccaataaggtaaaaggtatcatcaacggggcaatgggctttgacgaa
gagaacctgctgcccatgtataaactgatcgtcggtaagccgggtagttcctatacgttc
tccattgcacagcgtatcggtttacatcctgcgctgatatcccgcgccaagaacctggtg
gatgaagggcatttccagctggataaactgctgaataaagccgaacaggacctccagaag
attgaggccaaggagaaggaactgcagaagctcctgaaagaaaatgaaaagctgaagcgt
gaatatgagatcctctccgacaaggaaaggaaaacacagcaattcaccaccctcaagctc
cagaataagatcaaggaagaggaactgcaatacctgaaggatatggagcgcaagatgaag
cagatcgtgatagagtggaagcgtaccgacgacaagcagaaagtgctcaagcaggccgag
gcattgttattccgtaaaaaggaaaagcagatcaacgagcgcttcgaaaagaaagtgcag
gagaaattccttgaagtagtaggaggggacctcaaactgggcgaccaggtgaaaataaaa
agtaatggccaggtaggaaagctgatggagatccgcgacaaacgtggcatcgtcaagctg
gggaacatcccgatgaacgtacctatggccgacctggtactggtaaaagagcgacccaag
gaagcgaaggaaacagcaaagtaa
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