Chitinophaga filiformis: MYF79_27010
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Entry
MYF79_27010 CDS
T08225
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYF79_27010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_27010
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_27010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Flu_PB2_3rd
Mor
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
UPK68613
UniProt:
A0A1G7ZZF3
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All DBs
Position
complement(6933264..6934121)
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AA seq
285 aa
AA seq
DB search
MRQLKIATQITNRDSQAVEKYLQEISKIPLLTPEEETVLAQRIKMGDQKALERLTTGNLR
FVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAE
QGRLVRLPQNKIGTYNKANKAYMAFEQENEREPSTEELAEILEMSESEINNIFQSNTRHM
SLDAPVHEAEDVAMGDLLEGGDITDDDVMRDSLREEIRRVLKSLSPREAEIVNAYFGLDG
ENGATIEQIGQKYDLTKERIRQIKERAIKRLQKARYSGALKSYLG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacttaaaattgccacccagatcacaaaccgtgattcgcaggcggtagaaaaa
tacctgcaggagatttcaaagatccctttgttaacacctgaggaagagaccgttttggcg
cagcgcattaagatgggtgaccagaaggctcttgaacgtttaactacaggaaaccttcgt
ttcgtagtatcagttgcaaagcaatatcagcaccaggggcttagcctcagcgacctcatt
aacgagggcaatctcggcttgatcaaggctgcgcaaagattcgatgaaacgaaagggttc
aaattcatttcttatgctgtttggtggattcgtcaatccatactgcaggctttagcagaa
cagggccgtctggttcgtctgccgcagaataaaatcggcacttacaataaagctaataaa
gcctacatggcgtttgaacaggagaatgaaagagagccatcaactgaggagttagcagag
atcctggaaatgtctgaatcagagatcaacaacattttccaaagcaatacccgtcacatg
tcactggatgctccggtacacgaagcagaagatgtggctatgggagacctgctggaaggt
ggagatatcactgacgatgacgtaatgcgcgattcactgcgtgaagagatccgtcgtgta
ctgaaatcgctcagcccacgtgaagcggaaatcgtaaacgcatactttggtctggatggt
gagaacggagctacgatcgaacagattggtcagaagtacgatcttacaaaagagagaatt
cgtcaaatcaaggaacgcgccatcaaaaggctgcaaaaagcccgctacagcggagcattg
aaatcttacctgggttaa
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