Chitinophaga filiformis: MYF79_27080
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Entry
MYF79_27080 CDS
T08225
Name
(GenBank) DEAD/DEAH box helicase
Organism
cfil
Chitinophaga filiformis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UPK68627
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Position
6949137..6952016
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AA seq
959 aa
AA seq
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MGKTITQGNNNKYKAMPVLLLELQSNHPTPVKISAGILKEDAGGRTCQRMPLNDKKSLSI
FNTLPAGVQHLLQPCTQEAMVYKELQLKEKFRDNPVKSQTLQQFIQEGMQQYLYHTLQQL
RPLTPVLPWYTMITDDSMLMKHTRPATVNNFPPVLSFELRRTPTGILRVAALVTINGQAF
PLSDFEHYGFVLRSRGELFILPPAAATTLEQFPGGFIDIPAQEEATFIEHTLPALSQQYS
VDKSILLQKEIIDIPPECNIWLSELNKAFLVLTPQWQYGNFSIEDTGEPVVLKAEGDIQY
EIRRHMEAEKELIAFIRGLHPRFAQQRNGYFYLPFADAEKGQWLVKCYHKLTDRNIGVYG
MDQLQHFRYNTNVPVMDVRWHGDDKDSFDLEIDVRYGDIPVALTDIQKALLHRQPHLLLK
DGTIGVIPDEWLHKYDLLWKLGQVSKDKLKLSRLHFTVAQEMLEAQGTVVKENAVEQLQR
LQAKSAEHFPVPAAIQAQLRSYQQAGFEWMCLLDAMRWGGCLADDMGLGKTLQTITFLQH
LCEKYPGETHLVVCPTSLIYNWQAELQKFAPGLRYTVYHGGNRQYDAAYWKQQQLVITSY
GTVRSDTAVFTTHIFGYVVLDESQVIKNPSSQTTKALQVLQSRNRLILSGTPIQNNTMDL
YAQMNFANPGLLGNQAFFRSEFAMPIDKYADAEKAGRLRKLIYPFLLRRTKEQIAQDLPD
KTEIIMWCEMGEEQRKSYNRIRDMYKEKLMARINEEGMAASTIYVLEGLTRLRQVCNAPQ
LVAEEAHVTSSVKLDELMREISENTGAHKVLVFSQFTGMLQLIAKSMESEGLPFFYLDGS
TKAEHRQQLVNQFQEDENVRVFLISLKAGGVGLTLTAADYVYLVDPWWNPAAEQQAIDRT
HRIGQQNKVFAYKMICKDSVEEKILALQERKKMIADDLISEDTGFVKKLTEEDVAFLFS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaccatcacacaaggcaataacaataagtataaagcaatgcctgtattgctg
ctggaattacagtccaatcaccctaccccggtgaagatcagcgccggcatcctgaaagaa
gacgccggcggccgtacctgccagcgcatgcccctgaacgataaaaagtcattgtccatc
ttcaataccctgcctgccggtgtacaacacctgttgcagccctgcacgcaggaagccatg
gtctataaagagctgcaactcaaagagaaatttcgcgacaatcccgtgaaatcccagacc
ctgcaacaattcatacaggagggcatgcagcaatacctctatcacacacttcagcaactg
cgccccctgacaccggtattaccctggtataccatgatcacggacgacagtatgctgatg
aaacatacacgccctgcaacggtgaacaacttcccgccggtactctcttttgaactgcgg
cgtacgcccacaggcatattgagggtggccgcgctggtcaccatcaacggacaggctttc
ccgctctccgattttgaacattacgggtttgtgctccgcagccgcggggaactcttcatc
ctccctcctgctgcggctaccacgctggagcaatttcccggcggatttatcgatatcccg
gcacaggaggaagccaccttcatcgaacataccctgccggccctcagtcagcagtacagc
gtcgataaaagcatcctcctgcagaaagagatcatcgatatcccaccggaatgtaatatc
tggctgagtgaactgaataaagccttcctcgtactgacgccacagtggcagtacgggaac
ttcagcatagaggataccggtgaaccggttgtcctgaaagcggaaggcgacatccagtac
gagatcaggcgccatatggaggccgaaaaagaactgatcgccttcatccgcggattgcat
ccccgcttcgcccagcaacggaatggttacttctatcttccttttgctgacgcagagaag
ggtcagtggctggtgaaatgttaccataaactgacagaccggaacattggcgtatatggc
atggaccagttgcagcatttcaggtacaacaccaacgtacctgtcatggacgtgcgctgg
cacggtgacgataaagacagtttcgacctggagatagacgtccgctatggcgatatccct
gtagcactgacagatattcagaaagccttactgcaccggcagccgcacctcctgctgaaa
gacggtaccatcggtgttattcccgacgaatggctgcacaagtatgacctgctctggaaa
ctgggacaggtcagcaaagacaaactgaaactgtcaaggctgcactttaccgtggcccag
gagatgctggaagcgcagggtactgtcgtaaaggaaaacgccgtggagcaattacagcgc
ctgcaggctaaatcggccgaacacttccccgttcccgcagctatacaggcgcaactacgc
agttaccagcaggcaggctttgagtggatgtgcctactcgacgccatgcgctggggtgga
tgcctggcggatgatatgggtcttggtaagaccctccagaccatcactttcctgcaacat
ctttgtgagaaatatcccggggagacgcacctcgttgtgtgccccacctctctgatctat
aactggcaggccgaactgcaaaaatttgcccccggcctgcgctacaccgtgtaccacggc
ggcaacaggcagtacgacgccgcctactggaaacagcaacagctggtcatcaccagctat
ggtaccgtgcggagtgatactgccgttttcaccacacacatcttcgggtatgtagtgctg
gacgaaagccaggtgatcaagaacccttcctctcagaccacgaaggccctgcaggtatta
caaagccgcaaccgcctgatactgagcggtacccccatccagaacaataccatggacctt
tatgcacagatgaactttgccaatccgggcctgctgggcaaccaggcctttttccgctcg
gaatttgccatgcctattgacaaatatgccgatgccgaaaaggcgggccgcctgcgcaaa
ctcatctatcccttcctgctgcgccgtacgaaggaacaaattgcacaggatttgccggat
aagaccgagatcatcatgtggtgtgaaatgggcgaggaacagcggaagtcgtataaccgc
atccgcgatatgtacaaggaaaagctcatggcgcgcatcaatgaggaaggaatggccgcc
agtaccatctatgtgctcgaaggcctgacccgcctgcgacaggtatgtaatgcgccccag
ctggtagcagaagaagcacacgtgaccagctctgtcaagctggacgagctgatgcgggag
atcagcgagaacaccggggcacataaagtactggtattctcacaatttaccggtatgttg
cagctcattgcgaagtccatggaaagcgaaggtctccccttcttctacctggacggcagc
accaaagcggaacaccggcagcagctcgtgaaccagttccaggaagacgaaaacgtaagg
gtcttccttatcagcctgaaggccggtggtgtgggactaacgctgaccgccgccgattat
gtgtatctggtggacccctggtggaaccccgcggcagagcagcaggctattgaccgtaca
caccgtatcgggcagcagaataaggtctttgcgtacaagatgatctgtaaagatagtgtg
gaagaaaagatcctggccctgcaggagcggaaaaaaatgattgccgatgacctgatcagt
gaagacactggtttcgtgaagaagctgacggaagaagatgtggcattcctgttcagctaa
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