Chitinophaga filiformis: MYF79_27955
Help
Entry
MYF79_27955 CDS
T08225
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfil02000
]
MYF79_27955
Transporters [BR:
cfil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MYF79_27955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_2
TPR_8
TPR_1
TPR_12
TPR_10
TPR_19
TPR_9
TPR_17
TPR_7
TPR_16
SHNi-TPR
Motif
Other DBs
NCBI-ProteinID:
UPK68799
LinkDB
All DBs
Position
complement(7146814..7148169)
Genome browser
AA seq
451 aa
AA seq
DB search
MINRILFTSAIILLSACTEKLDIKPDQSMVIPQTVADFQAMIDYTDILNAYIPSYGEAGA
DNYYITDATYNGLVLNSDRNAYIWGKDIFPVKDIAVDWANGYVRINYCNLVLEGLEKLTT
GKGTAAYNNVKGAALFFRALSFYTLAEEFSKPYDSATAATDPGIPLRLKSEMEVIYQRAS
VKATYEQVLSDLAVAAELLPDITTFKTRPSKAVIYGLLARIYLSLGNYQEALKNADLSLS
IYHELLDYNTIDPDAGLPFDEFNDDVLFYAKLSGNGLTRMATMIVDSLLYRQYQDNDLRK
VLFFRDGAGGIKMFKGTYSGNSFQHFGGIGVDEMYISRAECYARMGDVAHAMEDLNTLLR
TRWKTGTYADMTASDPDDALRKILVERRKELLFRGLRWLDLRRLNKDTRFAKTLKRIVNG
SVYELPPNDVRYVYPIPADEISYSGIEQNVR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcgtatattatttacgagtgccatcattttattgtcggcatgtacagaaaag
ctggatataaagccggatcagtctatggttattcctcagacagtggctgattttcaggca
atgattgactacacggatatattgaacgcttatattccctcttatggagaagccggtgct
gataattattatataacagacgccacctacaacgggcttgtattaaacagtgatcgaaat
gcgtatatatggggaaaggatatttttccggtgaaagatatcgcggttgactgggctaat
ggttacgtaaggataaactattgtaatctcgtcctggaaggattagaaaaactgacaacc
ggcaaaggaactgctgcttataataacgtaaaaggcgctgccttgtttttccgggcatta
tctttctacacgttggcagaagaattcagtaagccatatgacagtgctactgcggctacc
gatccgggtatcccattaagattaaaatcggaaatggaggtaatttatcagcgcgcaagt
gtcaaggctacctacgaacaggtactgtcagatctcgcagttgccgcagaacttttaccg
gatatcactacttttaaaacccggccgtccaaagccgtgatctatggtttgttggcaagg
atatatcttagtttgggaaattaccaggaagcgctgaaaaatgctgacctgtctttgtca
atttatcatgagctgctggattataatacgattgatcccgatgccggactgccttttgat
gagtttaatgatgacgtattgttctatgcgaaactttcaggtaatgggttgacccggatg
gctactatgattgttgactctcttttgtacaggcaataccaggataatgaccttcgaaag
gtactttttttcagagatggggcgggcggtataaagatgtttaaaggtacttatagcgga
aatagctttcagcattttggaggaataggcgttgatgagatgtatatcagccgggcagaa
tgttatgccagaatgggagatgttgcacatgctatggaagacctgaatactttactgaga
acaagatggaagacaggcacttatgcagatatgacagcatcagatccggatgacgcattg
agaaaaatactggttgaaagaagaaaggaattgttgttcagagggctgcgttggctcgac
ctgagacgtttgaacaaggacaccaggtttgccaaaacgcttaaaaggatagtgaatggt
tcagtctatgaattacctcccaatgacgtgcgttatgtatatccgattcccgcggatgaa
ataagttatagtggtatagaacagaatgtcagataa
DBGET
integrated database retrieval system
