Chitinophaga filiformis: MYF79_28905
Help
Entry
MYF79_28905 CDS
T08225
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfil01002
]
MYF79_28905
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
MYF79_28905
Peptidases and inhibitors [BR:
cfil01002
]
Cysteine peptidases
Family C82
MYF79_28905
Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MYF79_28905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
YpoC
Peptidase_M15_2
Motif
Other DBs
NCBI-ProteinID:
UPK68983
LinkDB
All DBs
Position
complement(7393017..7394678)
Genome browser
AA seq
553 aa
AA seq
DB search
MKYRFLRDNLTIVFVLFSLFACHRKRVLREKEIVKDVRQLSEVIPENIAERLEYIVDNED
VMEDSVPALRSGALTYFYQQTGNNPVWSSDGALDPGADSLFYYVSHADESGLNPASYHNV
ALTQAMKRLKEDDAARKDAALWAQIDVLMTDAFMKMATHLRFGIAPRDSITLRRDSIYSD
TLLANYLTAALHQHIVGATLRLQEPQHQGYQQLKSAWINFKGKYCDMKWDSLPTSYTDTF
AYRQQLINRLVQSGHLDTSGGHSTDTVLLKRGIRAFQKEFNMYEDGQAGKKTVQALNKTF
RDWRAQVAVNMDRWRKLPDTLPQRFILVNVPAYRMELWDSGSVVLTSKIIVGAPRTRTPL
LNSRMTNFIMYPYWRVPFSITIKEMLPAIKKDRAYLAKKSLEIIDRDGNAVNPDSVNWGR
MSKNYFPYVLRQMDGLENSLGIMKFNFMNKYSVYLHDTNNRGLFSNAYRALSHGCVRVQQ
WDSLAMYLTKDDTRHPRDSMRMWLANGNKKQIDIQHAIPIYLRYFSAEGREGSLVFHEDI
YGEDKVLRKIMGM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataggtttctaagggacaatttaactattgtatttgtattgttttcattgttt
gcctgccacagaaagcgggtgctccgggaaaaagaaatagtaaaggatgtacggcagcta
agtgaggtcattccggagaatatagcagaacgtcttgaatatatagtggacaatgaagat
gtcatggaggatagtgtaccagcgctgcgtagcggggcactgacttatttttaccagcaa
accggcaacaatcccgtatggtcttccgatggtgcgctcgatcccggggccgattccctg
ttctattacgtgtctcacgctgatgaatcagggctgaatcctgccagctatcacaatgtg
gcactgacacaggctatgaagcgcctgaaagaagacgatgccgccaggaaagatgctgcg
ctctgggcacagatcgacgtgctgatgacagacgcttttatgaagatggccacccacctg
cgttttggaattgccccacgagatagtattaccctgcgccgggattcaatttattccgac
accttgctggccaattatctcaccgccgctttacaccagcatattgtcggcgccacctta
cgtttgcaggagccgcagcaccagggataccagcagttgaaatcagcctggatcaatttt
aagggaaaatactgcgacatgaaatgggattctctgcccacttcatatactgatacattt
gcctaccgtcaacagctgatcaaccgcctggtgcaaagcggtcacctcgatacatccggt
gggcatagcactgataccgtgcttctgaaaaggggcatccgcgcttttcagaaagaattt
aatatgtatgaagatggccaggcaggtaaaaaaactgtccaggcgctgaataaaaccttc
cgcgactggcgtgcgcaggtggccgtaaatatggaccgctggcgtaaactgcctgatacc
cttccccagcgctttatcctggtaaatgtccccgcttacagaatggaactgtgggatagc
ggatcggtagtacttacctcgaagatcattgtgggtgcgccacgtacacgtacgccgctg
ctcaattcccgcatgaccaatttcatcatgtatccctactggcgcgtgcctttcagcatc
accataaaggaaatgttgcccgctattaaaaaagacagggcctacctcgcaaaaaagagc
ctggagatcattgacagggatggaaatgccgtcaatccagacagcgtgaactgggggcgc
atgagtaagaactacttcccctatgtactccgccagatggacggtttggaaaactcactg
ggtatcatgaagttcaactttatgaacaagtactcggtatacctccacgatacgaacaac
aggggccttttctccaatgcctacagggctttaagtcacggctgcgtaagagtgcagcag
tgggatagcctggccatgtacctcacgaaagatgatacccggcacccccgcgatagcatg
cgtatgtggctggcgaacgggaataaaaagcagatcgatatccagcatgccatccctatt
tatctccggtatttttcagcagaaggaagggagggaagtctcgtatttcatgaggatatc
tatggagaagacaaggtgctgcgaaagataatgggcatgtag
DBGET
integrated database retrieval system
