Chitinophaga filiformis: MYF79_30060
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Entry
MYF79_30060 CDS
T08225
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03030
DNA replication
cfil03430
Mismatch repair
cfil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYF79_30060 (dnaE)
03430 Mismatch repair
MYF79_30060 (dnaE)
03440 Homologous recombination
MYF79_30060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfil03032
]
MYF79_30060 (dnaE)
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_30060 (dnaE)
Enzymes [BR:
cfil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYF79_30060 (dnaE)
DNA replication proteins [BR:
cfil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYF79_30060 (dnaE)
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYF79_30060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
SLIDE
Motif
Other DBs
NCBI-ProteinID:
UPK69209
UniProt:
A0ABY4I1P8
LinkDB
All DBs
Position
7691887..7694832
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AA seq
981 aa
AA seq
DB search
MYLNCKSFFSLRYGTIDTKDLVRIARETGVTSLALTNINITSDTWNFVKECQEQGIKPII
GLECRNGHELKYILLARDMEGWFYINRFLSDHLHKALPFPDRAPAFPGIFAIYAWGTLPL
HDLHAHELLGIRRREINKLFRVDTMSYQHKLVILQPVTFQDTDHYELHRVLRAIDQNILI
SQLLPHTTAQADEQFLPPAILFESFEQYPHIISNTVRVMDACQIDFNFKTPRNKKHFTNS
EEEDHALLRQLAYEGMLRRYGPDNEEAKARIEKELGVVQEQHFDCYFLITWDIIRYAQER
GFFYVGRGSGANSIIAYCLKITDVDPIELNLYFERFLNPYRRSPPDFDIDFSWRDRDEII
DYVFNKYGNVHTALLGTVTTFQQNATIRELGKVYGLPKHEIDKILDTPFQPDLTGDSVQR
NILRYSQLMSGAKAFPNHLSIHAGGILISEAPIHQHCATYMPPKGFSTAQLDMHQAEAIG
LFKFDILSQRGLGHIRDSLAIIKENKGIDIDIHDVKAFMQDPRVQHELKTVNTIGCFYIE
SPAMRQLLQKLQCEDYLTLVAASSVIRPGVAQSGMMRQYVHNYRNQDKVVYLHEIVKQVL
SETFGIMVYQEDVIRIVHEYADMDLADADILRRAMAGKYRGQGDFQKIEQQFFTNCKRLG
RPDDVTKELWRQIASFSGFSFSKAHSASFAVESYQSLFLKTYFPAEFMVAVINNFGGFYN
RELYFRELHKTGAIIKAPCINNSEYYTRITGNTVYTGFIHIEGLEEKWMQEVLEERTLYG
AFENLEDFVARVAPPPEQLDILIRIGAFNFDAHTKKELLWKSSLLLRKRAPHAEHIQPLF
REQVPECQLPMLSYHEHEHAFEEIALLGFPLCSPFDILQHDQQGYVPAKRFKEHKDKLIS
TLGYLVCTKGIYTSKGIPMSFGTFMDVNGDFIDTVHFPDILKQYPFQKGGFYILQGKVTA
EYDVYSIEVSYMRKIGYFEDK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcaactgcaaatccttcttcagcctgcgctatggtactattgatacgaaagac
ctggtcaggattgcccgtgaaacaggcgttacatctcttgcgctaaccaatatcaacatc
acatccgatacatggaacttcgtaaaggaatgccaggaacaaggcattaaacctatcata
ggtctcgaatgcaggaacggacacgagctgaaatacattctgctggcgcgcgatatggag
ggatggttctatatcaaccgcttcctctccgatcatctgcataaagcacttcccttcccc
gaccgtgccccggcctttcccggtatatttgccatctatgcctggggaaccctgccattg
catgatctgcatgcacatgaactgttaggcatccgccgccgcgagatcaataaactgttc
cgcgtagataccatgtcctaccagcacaaactcgttatactgcaacctgtcacttttcag
gataccgatcattatgaactgcatcgtgtattgcgcgctatcgatcagaatatcctcatc
agtcagctgctgccacataccaccgcccaggcagacgaacagttcctgccgccggccata
ttgtttgagagctttgaacaatatccgcatatcatcagcaatacagtgcgggtgatggat
gcctgccagatcgacttcaactttaaaacaccccgcaacaaaaaacattttacaaacagt
gaggaagaagaccatgcgctgctcaggcaattagcatatgaaggcatgctgagacgttat
ggccccgacaatgaagaagcaaaagcgcgcattgaaaaggaactgggtgttgtgcaggaa
cagcattttgattgttatttcctcatcacctgggatatcatccgctatgcgcaggaaaga
ggcttcttctatgtgggccgtggtagtggcgctaattctattatcgcgtactgcctgaag
atcacagacgttgaccccatagaactgaatctttatttcgaaagatttctcaatccttat
cgcagatctcctcccgactttgatatcgacttctcatggcgggacagggatgagatcatt
gactatgttttcaacaaatatggcaacgtacatacagccctgttgggtacggttactacg
tttcaacagaatgcaaccatccgggaactgggcaaggtatatggtcttccaaaacacgaa
atagataaaatactggacacgcctttccaacccgatctcacgggcgatagtgtgcagcgg
aatatcctgcgctacagccagctgatgtcgggcgcaaaggcatttcccaatcatcttagc
atccacgcaggcggtatcctcatcagtgaggcgcccattcatcagcactgcgctacttat
atgccacccaaaggcttcagcacggcacaactggatatgcaccaggcagaagctatcggg
ttgttcaaattcgatatacttagtcagcggggcctcggtcatatcagggactccctggcc
attatcaaagaaaataaaggcatagatatcgacatccatgatgtaaaagcattcatgcag
gatccacgtgtacagcacgagctgaaaacagtgaataccattggctgcttttatattgaa
tcgcccgccatgcggcagttgttacagaaattgcaatgtgaagactatctcacgctggta
gccgccagctctgtaatacggccaggcgtagcgcaatcaggtatgatgcggcaatatgtg
cacaactaccgtaaccaggacaaggtagtatacctgcatgaaattgtgaagcaggtatta
agcgaaacattcggcatcatggtataccaggaagatgtgatcaggatcgtgcatgaatat
gctgatatggaccttgccgatgctgacatcctgcgcagggctatggcagggaaataccgc
ggacagggagactttcagaaaatagaacagcagttcttcacgaactgtaaacggctggga
agacctgacgatgtaacaaaggaactctggcggcagattgccagcttctccggcttctct
ttttcaaaggcacactcggcaagctttgcagtggagagttaccagagccttttcctgaag
acttatttccctgcggagtttatggtagcagttatcaacaacttcggcggcttttataac
agggaactgtactttcgtgaattacataagaccggtgctatcattaaagcaccctgcatt
aataacagtgaatactatacgagaataacaggcaacacggtgtataccggcttcattcat
attgaaggactggaagaaaaatggatgcaggaagtactggaagaacgtacattgtacggt
gctttcgagaacctggaagattttgttgcacgtgttgcgccaccgccggaacaactggat
atactgataagaataggcgcttttaattttgatgcgcataccaaaaaagaattgctgtgg
aagagcagcctgctgctgagaaaaagggcgccgcatgcagaacatatacaacccttgttc
cgggagcaggtacccgaatgccagttaccaatgttatcgtatcatgagcatgaacatgca
ttcgaagaaattgcattgctgggctttcccttatgctctccctttgatattcttcaacat
gaccagcagggatatgttcctgcgaagcgttttaaggagcataaagacaagcttatttcc
acactgggatacctggtgtgtacgaagggaatttataccagcaaaggcattcctatgagc
tttggcaccttcatggatgtaaacggcgattttattgacaccgtacatttccccgatatc
ctcaaacaatatccttttcagaaaggaggtttttatatactgcagggaaaggtgacagcc
gagtatgatgtgtattcaattgaggtgagctacatgcggaagatcggctactttgaagat
aaataa
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