Chitinophaga filiformis: MYF79_31085
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Entry
MYF79_31085 CDS
T08225
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03030
DNA replication
cfil03430
Mismatch repair
cfil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYF79_31085
03430 Mismatch repair
MYF79_31085
03440 Homologous recombination
MYF79_31085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfil03032
]
MYF79_31085
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_31085
Enzymes [BR:
cfil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYF79_31085
DNA replication proteins [BR:
cfil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYF79_31085
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYF79_31085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_14
AAA_22
RuvB_N
AAA_5
RCF1-5-like_lid
Rad17
AAA_30
AAA_2
AAA_7
AAA_24
AAA_18
AAA_19
NTPase_1
AAA_16
RNA_helicase
Mg_chelatase
nSTAND3
Sigma54_activ_2
AAA_33
SRP54
Motif
Other DBs
NCBI-ProteinID:
UPK69410
LinkDB
All DBs
Position
7950573..7952459
Genome browser
AA seq
628 aa
AA seq
DB search
MENFIVSARKYRPQNFSTVVGQSHITTTLKNAIRNNQLAHAFLFCGPRGVGKTTCARILA
KTINCENLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFAPQAG
KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TIQDTVEHLQEICQKEHIQAESDALHLVAQKTDGCMRDSLSTLDKIVSFTGGHLTYQNTL
EHLNILDYDYFFKVMDAVLQQDVATALLIFDEILQKGFEGDNFLNGWAEFLRNLLMSKEE
KVLHLVEVSGNLKDRYKQMSGKVSPSYLITALHLLNETEINYRMARNKRLHVEMALIKLC
FLQQAVTLVSDDQTGEVVKKKLVADGAVPQKLRSSFIQAAPGPKPVAGQPATTSSIAANE
ARLTIETPAPAANHIQQTPAQPVQPVQRQAPAVQPATAPATAATATAARPGQTAGPQPKL
TGLAAMKEALAAKQQVQSVHQAIPMTLGALHVYWEEFINTFRQANKMTVVSNLQLAVINL
AGPEEIAIVSRNIVQFRFMEEEKLSISAFFKEKFHNPAIVLTLQLDESQQTVDIGPAPLS
SREQFQKMTEKYPLVKELKDKLNMELDF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttatcgtttcagcccgtaaataccgtccacagaatttttcaaccgtagtc
ggacaatcacatattactaccacccttaaaaatgcgatccgtaacaaccagctggcacat
gccttcctgttctgcggtccgagaggtgtgggtaaaacaacctgtgcccgtatactggcc
aaaacaatcaactgtgaaaacctgcagcctgatggggaagcgtgtaatcaatgtcattcc
tgtacctccttcaatgaaggaagttccttcaatatccacgaactggatgctgcgtccaac
aactcggtagatgatatccggacgctggtagagcaggtacgtttcgcgcctcaggcagga
aaatacaagatctatatcatagatgaggtacacatgctcagttcttccgcattcaatgcg
ttcctgaaaacgctggaagagcctccttcttatgccattttcatcctggctaccacagaa
aagcacaagatccttccgactatcctgagccggtgtcagatctttgactttaaacgcatc
actatccaggatactgtagagcatttacaggagatctgccagaaagagcatatccaggca
gaatctgatgcgctgcacctggtagcccagaaaacggatggttgtatgcgtgactcactc
agtacgctggacaagatcgtcagcttcaccggcgggcacctgacttaccagaacacgctg
gagcacctgaacatcctggattatgattatttctttaaagtgatggatgccgtgctgcaa
caggatgttgccactgccctgttaatatttgacgagatcttacagaaaggtttcgaggga
gataatttcctgaacggctgggcggagtttctccgtaacctgctgatgagcaaggaagaa
aaggtgctgcacctggtggaagtatccggtaatcttaaagacaggtacaagcagatgtcc
ggcaaggtaagcccgtcttacctgatcacggcgctgcacctgttgaatgaaacggagatc
aactacaggatggcccgcaacaaaaggctgcatgtggaaatggcgctgatcaagctatgc
ttccttcagcaggccgttaccttagtcagcgatgaccaaaccggagaggtagtaaaaaaa
aaactggtagctgatggtgcagtgccacagaagctacggtcttcctttatacaggcagcg
ccggggcctaaaccggtggcaggtcagccggccactaccagctccatagcagccaatgaa
gcaagactgaccattgaaacgccggcaccggcggccaaccatatacaacaaacacctgcc
cagcctgtacagcccgtgcaacggcaggcgccagcagtgcaacccgccacagcacctgca
acagctgcaacagctacagccgccaggcctggtcagacagcagggcctcaacccaagctg
accggccttgccgccatgaaggaggcactggctgccaaacagcaggtgcaatcggtacac
caggcaattcctatgaccctgggggcacttcatgtatactgggaagaatttatcaatact
ttcaggcaggctaacaaaatgacagtcgtgagcaatctccagctggctgttattaacctg
gcaggtcctgaagaaatagccattgtgagcaggaatatcgtgcaattccgcttcatggaa
gaagaaaagctctcaatttcggctttcttcaaagaaaagttccataacccggctatcgtg
ctgaccttgcagctggatgagagccagcaaacggtggatattggccccgcgccgctttcc
agccgggaacagttccagaagatgactgaaaaatatccgctggtgaaggaactgaaagat
aagttgaatatggaactggatttttaa
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