Chitinophaga filiformis: MYF79_31880
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Entry
MYF79_31880 CDS
T08225
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MYF79_31880 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_31880 (xseB)
Enzymes [BR:
cfil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MYF79_31880 (xseB)
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MYF79_31880 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF4088
Noelin-1
Motif
Other DBs
NCBI-ProteinID:
UPK69565
LinkDB
All DBs
Position
8125993..8126202
Genome browser
AA seq
69 aa
AA seq
DB search
MMDTNLTYEAAYKELQQIAREIETESVSVDVLAARVKRASELISFCQARLRATEAEVENI
IQQMEDKPL
NT seq
210 nt
NT seq
+upstream
nt +downstream
nt
atgatggacacgaatctgacatatgaagcagcctataaggaactgcaacagatagccagg
gagatagaaacagagtccgtttctgtcgatgtactggcggcaagagtgaaacgcgcttct
gaattaatcagcttctgtcaggcccgtttaagggcaacagaggcagaagtggagaacatt
atccagcaaatggaagacaaaccgctttaa
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