Chitinophaga filiformis: MYF79_32020
Help
Entry
MYF79_32020 CDS
T08225
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_32020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_32020
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_32020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
UPF0122
GerE
DUF6395
PhyR_sigma2
HTH_Mga
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UPK69593
UniProt:
A0ABY4I399
LinkDB
All DBs
Position
complement(8162868..8163377)
Genome browser
AA seq
169 aa
AA seq
DB search
MLDRRTFENTFREHHAACLAFAVHYTGDVHEAEEVVQQVFLRLWEKRETIDVAGAMKSYL
FAAIRNTAISNWRKETVRQEKEQVAGGLRAADGQAQSPAWELERMYQQALEVLPERCREV
FILSRQQQLKYAEIAEVMNISVKTVENQMGKALKIMHKELKEYLHVLLL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccgtcgtacatttgaaaatacctttagagaacatcatgccgcatgcctggca
tttgcggtgcattacaccggcgacgtccatgaggcggaagaggtagtgcagcaggtgttc
ctgcgactgtgggagaaacgcgaaaccattgatgttgcgggcgctatgaagtcttacctg
tttgccgccatccggaatacggctatcagtaactggcggaaggaaacagtaaggcaggaa
aaagagcaggtggcaggcggtctgcgggccgccgacgggcaggcacaatctcccgcctgg
gagttggagcggatgtatcagcaggcgctggaagtgctgcccgagcgttgccgtgaagta
tttatactcagccggcagcaacaattaaaatatgccgaaatagcggaggtgatgaacatt
tctgtgaagacggtggagaatcaaatggggaaggccttgaaaatcatgcataaagagctg
aaagagtacctgcacgtgttgttgttatga
DBGET
integrated database retrieval system