KEGG   Chitinophaga filiformis: MYF79_32020
Entry
MYF79_32020       CDS       T08225                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil  Chitinophaga filiformis
Pathway
cfil02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cfil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MYF79_32020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfil03021]
    MYF79_32020
Transcription machinery [BR:cfil03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MYF79_32020
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF UPF0122 GerE DUF6395 PhyR_sigma2 HTH_Mga HTH_24
Other DBs
NCBI-ProteinID: UPK69593
UniProt: A0ABY4I399
LinkDB
Position
complement(8162868..8163377)
AA seq 169 aa
MLDRRTFENTFREHHAACLAFAVHYTGDVHEAEEVVQQVFLRLWEKRETIDVAGAMKSYL
FAAIRNTAISNWRKETVRQEKEQVAGGLRAADGQAQSPAWELERMYQQALEVLPERCREV
FILSRQQQLKYAEIAEVMNISVKTVENQMGKALKIMHKELKEYLHVLLL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgctggaccgtcgtacatttgaaaatacctttagagaacatcatgccgcatgcctggca
tttgcggtgcattacaccggcgacgtccatgaggcggaagaggtagtgcagcaggtgttc
ctgcgactgtgggagaaacgcgaaaccattgatgttgcgggcgctatgaagtcttacctg
tttgccgccatccggaatacggctatcagtaactggcggaaggaaacagtaaggcaggaa
aaagagcaggtggcaggcggtctgcgggccgccgacgggcaggcacaatctcccgcctgg
gagttggagcggatgtatcagcaggcgctggaagtgctgcccgagcgttgccgtgaagta
tttatactcagccggcagcaacaattaaaatatgccgaaatagcggaggtgatgaacatt
tctgtgaagacggtggagaatcaaatggggaaggccttgaaaatcatgcataaagagctg
aaagagtacctgcacgtgttgttgttatga

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