Chitinophaga filiformis: MYF79_32050
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Entry
MYF79_32050 CDS
T08225
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_32050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_32050
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_32050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
UPF0122
HTH_10
PIF2
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
UPK69599
UniProt:
A0ABY4I2V3
LinkDB
All DBs
Position
complement(8172835..8173422)
Genome browser
AA seq
195 aa
AA seq
DB search
MKNAHIHPDSTCTDKYLWDMIRDDSVDAFNEVYRRYWDLLFHVTMKRLQVREIAEEIVQD
TFIILWEKRHDIEISALKPYLFAITRYAVFHYLASKQTIASRMKTLSHMSEAAGNNGADV
EALVNDRLLLQLIETVANELPEKSRQVFYYNKLLDYSIGQAAETFNISQKTAEGHLTKAL
KILRLKLSALHTVLF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaacgcgcacattcatccggattccacttgcacggataaatacctgtgggatatg
atcagggacgattccgtagacgcttttaacgaagtgtacaggcggtattgggacctgtta
tttcatgttaccatgaagcgcctgcaggtcagagagatcgcagaagaaatagtacaggat
accttcatcatcttatgggagaaaagacatgatatcgagatctccgcgctgaaaccctac
ctctttgccattacccgttacgccgtatttcattacctggccagtaagcagaccattgct
tccaggatgaaaaccttatctcatatgtccgaagctgccggcaacaatggggccgatgtg
gaggccctggtaaatgacaggctgctgttacaactaatagaaactgttgccaatgaactg
ccggagaagagccggcaggtattctactataataaactgctcgattactccattggccag
gcggcagagaccttcaatatatcccagaaaacagccgaagggcacctgaccaaagccctc
aaaatattacgcctgaaactaagcgctctgcacactgtcctcttctga
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