Chitinophaga filiformis: MYF79_32085
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Entry
MYF79_32085 CDS
T08225
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYF79_32085 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfil03019
]
MYF79_32085 (rny)
Messenger RNA biogenesis [BR:
cfil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYF79_32085 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UPK69606
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All DBs
Position
8181793..8183358
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AA seq
521 aa
AA seq
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MEVTLMSTIAAVVALIIGILLGKVIFAKNTQHKIQEAELQAQKIVSEAQLTAENLKKDRL
LEAKEKFLQLKSEHEKEVLQRNQKIADSENRIKQKEQTLNQKTENLQKQMQENEAIKENL
NRQMELVAIKRTELEKHQEEHIRRLEKVAALTAEEARHQLIESLKEEARSQALAHIQEII
EDAKLKANKEAKKIIIQSIQRTAAEQTIENAITVFNLESDEIKGQIIGREGRNIRAIEAA
TGVDLIVDDTPEAIVLSSFDPLRREIARLSLQRLVQDGRIHPARIEEVVEKTKKQLEEQV
MDIGERTVIELGIHGLHKELVRLVGKMRFRSSYGQNLLMHSKETANLCAVMAAELGLNPK
LAKRAGLLHDIGKVPDEETELSHALLGAKLAEKYGEHAAVVNAIGAHHDEMEMQYVISPI
VQACDAISGARPGARREIMQSYLQRIKDLENLALAHDGVEKAYAIQAGRELRVIVESDKV
TDNDADRLSFEIANKIQTEMQYPGQIKVTVIREKRAVNVAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaagttactttaatgtcgacaatagctgcagtggtggcattgatcataggtattttg
ttaggtaaggtgatttttgccaagaacactcaacataaaatacaggaggcagaattacag
gcacagaaaatagtatccgaagcacaacttaccgcagaaaacctcaagaaggaccgcctg
ctggaagcaaaagaaaaattcctccagctgaaaagtgagcacgagaaagaagttttacaa
cgtaaccagaaaatagcagattcagagaaccgcatcaaacagaaggaacagacgctgaac
cagaagacggagaatcttcagaaacagatgcaggaaaatgaggcgatcaaggaaaacctc
aaccgccagatggaactggttgctataaaacgtaccgagctggaaaaacaccaggaagag
cacatccgccgcctggaaaaagtagcggccctgacagcagaggaagcacgccaccaactc
atcgaaagcctgaaggaagaagcccgctcacaggcacttgcacacatccaggaaattatc
gaagacgccaaactgaaggcaaacaaagaagctaaaaagatcatcatacagtccatccag
cgtactgctgccgagcagaccattgagaacgctatcactgtgttcaacctggaaagtgac
gagatcaaaggtcagatcattggtcgtgaaggccgcaacatccgtgctatcgaagcagca
accggtgttgacctgatcgtggacgataccccggaggctatcgtactgtcttccttcgat
ccattacgccgcgagattgcccgtttgtccctgcaacgcctggtacaggacggccgtatc
caccctgcgcgtatcgaagaggtagtagaaaagaccaagaaacaactggaagaacaggta
atggatatcggggaaagaaccgtgatcgagctgggtatccatggcttacataaagaactg
gtacgcttggtaggtaaaatgcgtttccgttcctcttatggtcagaacctgctgatgcac
tccaaagaaacagctaacctttgtgctgtaatggcggcagaactgggcctgaaccctaaa
ctggcaaaacgcgccggtctgctgcatgacattggtaaagtacctgatgaagaaactgaa
ctgagccatgccctgctgggagcgaagctggctgagaaatatggtgagcatgctgctgta
gtaaatgctatcggcgcccaccacgatgaaatggaaatgcaatacgtgatctctcctatc
gtacaggcttgtgacgccatcagcggcgcacgtcccggtgcacgtcgtgagatcatgcag
agctacctgcaacgtatcaaagacctggaaaacctggccctcgcccatgatggtgtggaa
aaggcttatgcaatccaggccggccgcgaactgcgcgtgatcgttgaaagtgataaagta
accgataatgacgctgaccgtctgtctttcgagatcgctaacaagatccagactgaaatg
cagtaccctggtcagatcaaagtaaccgtgatccgtgagaaacgtgctgtaaacgtagct
cgctaa
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