Cytobacillus firmus: NAF01_00035
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Entry
NAF01_00035 CDS
T08260
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfir03032
]
NAF01_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_00035 (gyrA)
Enzymes [BR:
cfir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NAF01_00035 (gyrA)
DNA replication proteins [BR:
cfir03032
]
Prokaryotic type
DNA Topoisomerases
NAF01_00035 (gyrA)
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NAF01_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
URT70979
LinkDB
All DBs
Position
7070..9595
Genome browser
AA seq
841 aa
AA seq
DB search
MADTPRSQIKEINISQEMRSSFLDYAMSVIVSRALPDVRDGLKPVHRRILYAMHDLGMHS
DKPYKKSARIVGDVIGKYHPHGDSAVYETMVRMAQDFNYRYMLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMELLRDINKDTIDYQDNYDGEEKEPVVLPARFPNLLVNGTSGIAVGMA
TNIPPHQLGEVIDGVLAISKDPEMTIPELMDIIPGPDFPTAGMILGRTGIRKAYETGRGS
ITLRAKVEIEEKANGKETILVHEIPYQVNKAKLIEKIAELVRDKKIDGITDLRDESDRNG
MRIVIEVRRDANASVLLNNLYKQTALQTSFGINLLALVDGQPKVLNLKQCLEYYLEHQKV
VIRRRTQFELRKAEARAHILEGLRIALDHLDEVISLIRSSQTTDIAREGLMTKFNLSEKQ
AQAILDMRLQRLTGLEREKIEEEYANLVALIAELKAILADEEKVLEIIREELTEIKERFN
DKRRTEIVAGGIENIEDEDLIPRENIVLTLTHKGYIKRLPVSTYRAQKRGGRGIQGMGTN
EDDFVEHLITTSTHDTILFFTNKGKVYRAKGYEIPEFNRTAKGIPIINLLGVDKDEWVNA
IIPVEEFADDWFLFFTTKQGISKRSPLSSFANIRNNGLIALNLREDDELISVRLTDGSKE
IIIGTSHGMLIRFPEEDVRSMGRTATGVKGINLSSGDEVVGMEVLEDDSQVLIVTKNGYG
KRTPAEEYRVQGRGGKGIKTCNITDKNGSLVSMKAVTGEEDVMLITTGGVLIRMAVSDIS
TMGRNTQGVRLIRINEEAGEAVSTVARVEKEEEKDDEELTKPLEDADSLPEEEVTGDNSE
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgccaaggtcccaaataaaagaaattaacattagccaggaaatgcgttca
tcattcctggactatgccatgagtgtaattgtttcacgtgcccttccggatgtgcgtgat
ggcttaaagccggtgcatcgccgcattctttatgcgatgcacgatctcggcatgcattca
gataagccttataaaaaatcagcacgtattgtcggagatgtaattggtaagtatcatccg
catggtgactctgctgtttatgaaacaatggtgcgtatggcacaggactttaactatcga
tacatgctggttgatggacacggaaacttcggttcagtggatggcgactctgcagctgcc
atgcgttatacagaagcacgtatgtccaaaatatcaatggagcttttacgggatatcaat
aaagacaccattgattatcaggataactatgatggggaagaaaaggagccggttgtattg
cctgcccgtttccctaatttgctggtcaatggaacgtcaggaatcgctgtcgggatggcc
actaatattcctccccaccagcttggtgaagtaattgatggggttctagcgataagcaaa
gaccctgaaatgactattccggaactaatggatattatccctgggccggactttccgact
gccggaatgattttaggaagaaccggaatccgcaaagcctatgaaaccggccgcggttca
attactttgcgcgctaaagtagagattgaagaaaaagctaatggcaaagagaccattctc
gtacatgaaattccataccaggttaacaaagcaaagctgattgaaaaaattgcggaactt
gtcagagataagaaaattgatggtattaccgacctgcgtgatgaatctgaccgtaatgga
atgcgaattgtcattgaagtcagaagagacgcaaatgcaagtgtattattaaataatctc
tataaacaaactgccctccagacaagctttggaattaatcttctggcattggtggatgga
cagcctaaggttctgaatttaaagcagtgtcttgagtattatttagaacatcaaaaggtt
gttatacgccggaggacacagtttgaattaagaaaagcagaagcccgcgcacatatttta
gaaggcttaaggatcgcccttgatcatcttgatgaggttattagtctgatccgcagctca
cagacaactgatattgcacgagaaggcttaatgaccaaattcaatctttccgaaaaacag
gctcaggctatcctggacatgcgtctgcagcgtctgacaggcttggagcgtgaaaagatt
gaagaagaatatgcaaaccttgtagcccttatagcggaattaaaagctattttggctgac
gaagaaaaagtactggaaattatccgtgaagaattaacggagatcaaggaaagattcaac
gataaacgccggactgaaatagtcgcaggcggtatcgaaaatattgaagacgaagacctg
atcccacgcgagaatattgttctgacactaactcataagggatacatcaagcgtctccca
gtctcgacttaccgcgcccaaaaacgcggagggcggggaatccagggaatgggaacaaat
gaggatgattttgtggaacacctcattaccacatccacacacgatacaattcttttcttt
acgaacaaaggaaaggtttatcgcgctaaaggatatgaaatacctgaattcaaccgtact
gcgaaggggattccaatcattaaccttcttggagtggacaaagatgaatgggtaaatgcg
ataattcctgttgaagaatttgccgatgattggttcctgttctttaccactaaacagggg
atttccaagcgttcaccattatcatcctttgccaatatccgcaataatggcttaattgct
ttaaatctgcgtgaagatgatgaattaatttcagtgcgtctgacagatggcagcaaggag
atcattattggaaccagccatggcatgctgatccgattccctgaagaagatgttcgttcg
atgggaagaacggcaactggtgttaagggaattaacttaagcagtggtgatgaagtcgtt
ggcatggaagttcttgaggatgacagccaagttctgattgtaaccaaaaacggctatgga
aaacgtactccagccgaagaataccgtgttcagggcagaggcggtaaaggaatcaagacc
tgcaacatcacggataagaacggaagccttgtttccatgaaagctgtcacaggggaagaa
gacgttatgcttattacaacaggcggcgtactaatccgtatggcagtcagtgatatttcc
accatgggaagaaacacgcagggtgtcagactcatccgcataaatgaagaggcaggcgaa
gcggtatcgactgtagccagagttgaaaaagaagaggaaaaagatgacgaagaattaaca
aagcctcttgaagatgccgattcacttccagaagaagaagtaactggcgataatagcgaa
gaataa
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