Cytobacillus firmus: NAF01_00080
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Entry
NAF01_00080 CDS
T08260
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00550
Peptidoglycan biosynthesis
cfir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NAF01_00080
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfir01002
]
NAF01_00080
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
NAF01_00080
Enzymes [BR:
cfir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NAF01_00080
Peptidases and inhibitors [BR:
cfir01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
NAF01_00080
Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NAF01_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
URT73245
LinkDB
All DBs
Position
19730..21040
Genome browser
AA seq
436 aa
AA seq
DB search
MVMILGLLPGIHKAHAEDILNINADAAILVDAETGKILYQKNADKVLGIASMTKMMTEYL
LLEAVEKGKVKWDQEYAVSEYVWKVSQDRALSNVPLRRDGKYNIRELYEAMAIYSANGAT
IAIAETIAGSETNFVKMMNEKAAELGLKDYKFVNSSGLNNRDLKGSPPAGGPEEENVMSA
RDTAILAKELINRFPEVLETASTPRKTFREGTDDEIKMENWNWMLPELVYGYEGADGLKT
GTTDFAGYCFTGTALRDGNRYISVVMNAKGANGQATYKSRFDETKKMFDFGFTNFTKEEI
VPAKYQVKGQKTVPVTKGKEDKVKISSKDAIEMVMRNGEKENFKPVLVLDKKKLNENGEL
TAPIKKGEKVGYLTIESKEDGKLEFLSDKGKGNIQVDVVAAESVEKANWFVLTMRSIGGF
FGDLWGSVSSTVKGWF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgatattaggtcttttacctggtatacataaagcacatgcggaagatatttta
aatatcaatgccgatgctgctattttagtagatgcagagaccggaaagattttatatcaa
aaaaatgcggataaagtactgggtattgccagtatgacgaaaatgatgacagaatacctg
ctacttgaagccgttgaaaagggcaaagtgaagtgggatcaggaatacgcagtaagtgaa
tatgtatggaaagtttcacaggaccgtgccttatcgaatgtcccgttaagaagagacggc
aaatacaatatccgtgaattgtatgaagctatggctatatactctgcaaatggtgcaaca
attgcgattgcagaaacgattgccggttcagaaaccaactttgttaaaatgatgaacgaa
aaagcagcagagcttgggctgaaagactataaatttgttaattccagcggtttgaataac
cgagatttaaagggatcccctcctgcaggcggccctgaagaagaaaacgtcatgtcagca
agagatacagctattctggctaaagaattgattaaccggttcccggaagtactggaaacg
gcaagtacccctagaaagacgttcagagagggtacagacgatgaaattaaaatggagaac
tggaactggatgcttcctgagctggtatatggctatgaaggcgcagatggccttaaaaca
ggtacaactgactttgccggatactgcttcacaggaactgctctgagagatggcaaccgc
tacatcagtgttgttatgaacgctaaaggtgcgaatggtcaggcaacttataaatccaga
ttcgatgaaaccaagaaaatgttcgatttcggtttcaccaacttcacgaaagaagaaatc
gttcctgccaaatatcaggtgaaaggccagaaaacagtgcctgttacaaaagggaaagaa
gataaagtgaagatttcttctaaagatgcaatcgaaatggtgatgagaaatggggaaaag
gaaaactttaaacccgttcttgtattggataaaaagaaattaaatgaaaatggtgaattg
accgctcctattaaaaagggagaaaaggtcggctacttaacgatcgagtccaaagaggac
gggaagcttgagttcctgtctgataaaggcaaaggcaatatccaggtggatgttgtagcc
gctgaaagtgttgaaaaagcaaactggttcgtgctgactatgcgcagcatcggcggtttc
ttcggtgacctatggggaagtgtttcctcaactgtaaaaggttggttttaa
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