Cytobacillus firmus: NAF01_00085
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Entry
NAF01_00085 CDS
T08260
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00750
Vitamin B6 metabolism
cfir01100
Metabolic pathways
cfir01240
Biosynthesis of cofactors
Module
cfir_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
NAF01_00085 (pdxS)
Enzymes [BR:
cfir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
NAF01_00085 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
IGPS
Dus
TetR_C_27
NanE
His_biosynth
NMO
Motif
Other DBs
NCBI-ProteinID:
URT70983
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Position
21202..22083
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AA seq
293 aa
AA seq
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MKTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARM
ADPRIMEEVMGAVSIPVMAKARIGHIVEARLLEAMGVDYIDESEVLTPADEEYHLNKRDY
TVPFVCGCRDLGEAARRIGEGASMLRTKGEPGTGNIVEAVRHIRKVNAQVRKVVGMNEDE
LMTEAKLLGAPYELLLEIKSLGRLPVVNFAAGGVATPADAALMMELGADGVFVGSGIFKS
ENPAKFARAIVEATTHYQDYKLIAELSKELGTPMKGIEISSLAPEARMQERGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggtacagatcgtgttaaacggggaatggcagaaatgcaaaaaggcggcgta
attatggacgtcgttaacgctgagcaggcaaaaatcgcagaagaagctggtgcagtagca
gttatggcacttgagcgcgttccttctgatatccgtgcagccggcggtgtagcacgtatg
gcagatccgcgtattatggaagaagtaatgggtgcagtttcaatcccggtaatggcaaaa
gcgcgtattggccatattgtagaagctcgtttgcttgaagcgatgggtgtcgattacata
gatgagagtgaagttttaactcctgctgatgaagaataccatctgaacaaaagagactac
actgttccattcgtttgcggatgccgtgatttaggtgaagcagcacgccgtattggcgaa
ggtgcttccatgcttcgcacaaagggtgagcctggaactggaaacatcgttgaagctgtg
cgccatatccgcaaggtgaatgcacaggtgcgcaaggttgtcggcatgaatgaagacgag
ttaatgacagaagctaagcttctgggagcgccatatgagcttcttttggaaatcaagagc
cttggacgccttccagtcgtaaacttcgcagcaggcggcgttgcaacacctgcagatgca
gctctaatgatggagcttggtgctgacggtgtgttcgtaggatcaggtatcttcaaatct
gaaaaccctgcgaaatttgcacgtgccattgttgaagcaactacacattaccaggactac
aaattaattgctgaactttcaaaagaacttggcacaccgatgaagggaatcgaaatttct
tcattggctcctgaagctcgtatgcaggagcgcggctggtaa
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