Cytobacillus firmus: NAF01_00135
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Entry
NAF01_00135 CDS
T08260
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03030
DNA replication
cfir03430
Mismatch repair
cfir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAF01_00135 (dnaX)
03430 Mismatch repair
NAF01_00135 (dnaX)
03440 Homologous recombination
NAF01_00135 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfir03032
]
NAF01_00135 (dnaX)
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_00135 (dnaX)
Enzymes [BR:
cfir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NAF01_00135 (dnaX)
DNA replication proteins [BR:
cfir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NAF01_00135 (dnaX)
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NAF01_00135 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
TIP49
AAA_19
AAA_16
AAA_5
AAA_assoc_2
PIF1
DnaX_C
AAA_7
Rad17
AAA_24
AAA_28
Mg_chelatase
TsaE
DUF815
RNA_helicase
AAA_18
AAA_2
nSTAND3
Cytochrom_B562
Motif
Other DBs
NCBI-ProteinID:
URT70990
LinkDB
All DBs
Position
29098..30795
Genome browser
AA seq
565 aa
AA seq
DB search
MSYQALYRVWRPQQFIDVVGQEHVTKTLQNALLQEKISHAYLFSGPRGTGKTSAAKILAK
AVNCEKAPVTEPCNECSACRGITDGSIPDVIEIDAASNNGVEEIRDIRDKVKYAPNAVKY
KVYIVDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRITA
QAITGRMKLIADETDAAYEEQALQIIARAAEGGMRDALSLLDQAISFSQDRVTVEDALSV
TGAVSQGFLNKLARAVKDRDAASGLEFLEELLFQGKDPSRFIEDFILYYRDMLLYKAAPR
LEESMERVMLDEDFQQLAREVEPEELYELIEVLNKAQQEMRWTNHPRIFLEVAIVKLCQL
EQRERPGQAADIKPLMQQIEQLQHELAELKKNGIAVKDDGAPAVQKKPQRSSRKGFQAPV
GKVNEVLKQATKNDLVAVKSRWGEMLNLLVQNQMRSQAALLNEAEPVAASETALIVKFKY
EIHCQMAMDNAKFLDTLANVLFELLGKRLQLVGIPDEQWQSVREDFLRSQRDGDESGGGF
GGNEEEPHVAEAVKLFGAELIEIKE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcaagctttatatcgtgtttggcgcccgcagcagttcatcgatgttgtcggg
caggaacatgtgacaaagactttgcaaaacgccctgcttcaggagaagatatcacacgcc
tatttgttttccggcccccgcggaaccggtaaaacgagtgcggcaaaaatacttgcaaag
gctgttaactgtgagaaggcacctgtcactgaaccatgcaatgagtgttcggcctgcaga
gggattacagacggatcaattcctgatgtcattgaaatcgatgctgcatccaataatggt
gtagaagaaatcagggatatccgggacaaagtgaaatatgccccgaatgctgtaaaatac
aaggtttacatcgtcgatgaggtgcatatgctttccattggagccttcaatgcgctgtta
aaaacgcttgaagagccgcctaagcatgttatttttattttagccacaaccgagcctcat
aaaattcctctgacgattatttcccgctgccagcgattcgatttcaaacggattacggct
caggcgataacaggaagaatgaagctgattgcggatgaaacagatgcagcctatgaagag
caggccctgcagattatcgcaagagccgcagaaggcgggatgcgtgatgcgctcagtctg
cttgatcaggcgatctccttcagccaggatcgcgttacagtcgaagatgccctatctgta
acaggtgccgtgtcgcaggggtttttaaataaactggcaagagcggttaaagacagggat
gcagcatccgggctggaatttctggaggagctcctttttcaggggaaagatccatcccgc
tttatagaggactttatcctgtattaccgggatatgcttttatataaagcggctcctagg
cttgaggaatcaatggaaagagttatgctcgatgaggacttccagcagcttgcccgggag
gtggagcctgaagagctttatgagctgattgaagtgctgaacaaagcccagcaggaaatg
agatggaccaaccatccgcggattttcctggaagtggcgattgtgaagctgtgccagctt
gaacagcgggagagaccaggacaggctgcagacattaagccgctgatgcagcaaatcgaa
cagctgcagcacgagcttgctgaattaaagaaaaacggcatagcggtgaaagatgatgga
gctcctgctgtacagaaaaagccgcagagaagttcacgcaagggattccaggcgccagtc
gggaaagtgaatgaagtactgaagcaggcaacgaaaaatgatctcgtggctgtaaagagc
cgctggggcgagatgctgaacctgcttgttcaaaaccagatgcgctctcaggcagctctt
ctcaatgaagcagagcctgtagccgcatcggaaacagctcttattgtaaaattcaaatat
gaaattcattgtcagatggccatggataatgcgaaattcctggatacattggcgaatgtc
ctgtttgagcttttaggaaagagattgcagctggtcggcattccggatgaacaatggcaa
agcgtcagggaggatttcctgcgcagccagcgtgacggagatgagtctggcgggggcttc
ggcggaaatgaggaagaacctcatgtggctgaagcggtcaagttatttggcgctgaacta
atagaaattaaagaatag
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