Cytobacillus firmus: NAF01_00260
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Entry
NAF01_00260 CDS
T08260
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NAF01_00260 (rnmV)
Enzymes [BR:
cfir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
NAF01_00260 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
JetD_C
DUF2674
Motif
Other DBs
NCBI-ProteinID:
URT71009
LinkDB
All DBs
Position
52861..53421
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AA seq
186 aa
AA seq
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MKIKEIIVVEGKDDTAAIKRALDADTIETNGSAINGVTIEKIKLAHKTRGVIVFTDPDFP
GQKIRNTITNEVPGCKHAFIEKADALHKHGRGVGVEHASPEMIRQALKDAQVMQETYEET
ITQEDLVTAGLIGGEGAKERREKLGRLLKIGYTNGKQLHKRLMMFQISQKDFAEAIEAIR
KEEQNA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaggaaattatcgttgtagaaggcaaggatgatacagcggcgatcaagagg
gcgctggatgccgatacaattgaaacaaatggatctgccattaacggggtaaccattgaa
aaaataaagcttgcccataagaccagaggggtcatcgtgttcacagatccggactttccc
ggacaaaaaatccggaatacgatcaccaatgaagttcccggatgcaagcatgcctttata
gaaaaagcggatgccctccacaagcatggcagaggagtgggtgttgagcatgcatcgcca
gaaatgatccgccaggcattaaaggacgcacaggttatgcaggaaacctatgaagaaacc
attacccaggaagacctggtcactgcaggcctgattggcggggaaggtgccaaggaaaga
agagaaaagcttggcagacttcttaaaatcggttacacaaacggcaagcagcttcataag
cgcttaatgatgtttcagattagccagaaggattttgctgaggcaatagaagctattcgc
aaggaggaacaaaatgcataa
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