Cytobacillus firmus: NAF01_00840
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Entry
NAF01_00840 CDS
T08260
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NAF01_00840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfir03021
]
NAF01_00840
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_00840
Enzymes [BR:
cfir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NAF01_00840
Transcription machinery [BR:
cfir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NAF01_00840
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NAF01_00840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
URT73257
LinkDB
All DBs
Position
153325..154269
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEINDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTSIILNIKKLALKIYSDEEKTLEIDVQGEGVVKAADVTHDSDVEI
LNPDLHIATLGSNAHLRMRLTARRGRGYTPADQNKREDQPIGVIPIDSIYTPVSRISYQV
ENTRVGQMTNFDKLTFDVWTDGSTGPQDAVALGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
HKLEDLGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaaaccaaaaatcgaaacggttgagatcaacgatgatgccaagtac
ggcaagttcgtcgtcgagccacttgagcgtgggtatggtacaactttgggtaactcctta
cgtcgtatccttttatcctcactcccaggtgccgctgtcacatcgatccaaattgatggg
gtacttcatgagttctcaacaattgaaggcgtcgtagaagatgtaacatctatcatttta
aacattaaaaaactagcacttaaaatctactctgatgaagaaaaaacattggaaatcgat
gttcagggtgagggtgtagtgaaggcagctgacgtaacacatgacagcgatgttgaaatc
ctaaatccggatcttcatattgctactcttggttcgaatgcccacctgcgcatgcgttta
actgcaagacgcggacgaggctatacaccagctgaccaaaacaagagagaagatcagcca
atcggtgtgattccgattgattccatctacactccagtatctcgtatttcttaccaggta
gagaatacacgtgtgggtcaaatgactaactttgataagttaacattcgatgtttggact
gacggcagtacaggtcctcaagatgcggttgcacttggagcgaagatcttaactgagcat
ttgaatatctttgtcggtttaactgacgaagctcaaaatgccgaaatcatggttgaaaaa
gaagaagaccaaaaagagaaagtacttgagatgacaattgaagaactcgacttgtctgtc
cgttcttacaactgcttaaagcgcgctggcatcaatactgttcaggaattagccaataag
actgaagaggatatgatgaaggtccgtaaccttggcagaaagtcacttgaggaagtaaaa
cataaattagaagatcttggactgggcttacgcaaagacgattga
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