Cytobacillus firmus: NAF01_01870
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Entry
NAF01_01870 CDS
T08260
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03420
Nucleotide excision repair
cfir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAF01_01870 (pcrA)
03430 Mismatch repair
NAF01_01870 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_01870 (pcrA)
Enzymes [BR:
cfir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAF01_01870 (pcrA)
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAF01_01870 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NAF01_01870 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
URT71262
LinkDB
All DBs
Position
355863..358094
Genome browser
AA seq
743 aa
AA seq
DB search
MQFLTDKLLNGLNPQQQNAVKATDGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMRDRIHNMMGGAADDIWISTFHSMCVRILRRDIDRIGYNRNFTILDATD
QQSVIKSILKDKNLDPKKFDPRAILGSISSAKNELITPEEYAKTAGDYIQQVASDVYTEY
QKRLRRNQALDFDDLIMITIQLFQRVPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKLMA
SRFKNLCVVGDSDQSIYKWRGADIANILSFEKDYPNAQTIMLEQNYRSTKRILLAANEVI
SKNLNRKPKNLWTENAEGNKIFYYRADSEQGEAQFVAGKIKEYISTGKRSASDIAILYRT
NAQSRVMEEVLLKSNIEYSIVGGIKFYDRKEIKDILAYLRLIANPDDDISLQRVINVPKR
GIGSGSVDKIANFAQLHEMSMFEALESIELIGLSPKITKGAIEFRDLVKNYTQMQEYLSV
TELVEELLEKSGYRDMLIAEKSIEAQSRLENIDEFLSVTKNFEEASEDKTLIAFLTDLAL
VADIDKLDDDGEKAESVVLMTLHSAKGLEFPVVFLLGLEEGVFPHSRSLMEESEMEEERR
LAYVGITRAEEELFITNAQMRTLFGRTNMNPPSRFIKEIPADLLDGLEPAKKPSPFGSSP
FGSPSASRGVQPQRKAVIRPSASNTGGDDIAWKVGDKAQHGKWGTGTVVSVKGSGEGTEL
DIAFPKPVGIKRLLAKFAPITKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacagataaattattgaacggactaaacccgcagcagcaaaatgcggta
aaggcaactgacggaccacttcttataatggcaggagcgggaagcggaaagacaagagtt
cttacgcacagaattgcttacttaatggtagaaaagggtgtgaacccctacaatattctg
gcaatcacttttacaaacaaagctgcccgtgaaatgcgtgaccgtatccataacatgatg
ggcggagcagcagatgatatctggatttctacgttccactcgatgtgtgtgcggatctta
agaagagatattgaccggattggctataaccgcaattttacgattctggatgcaacggac
cagcaatcagttattaaatcgatcctaaaggataaaaatctggatcccaagaaatttgac
ccacgtgcaattttgggttcaatcagctcggcaaaaaatgaattgatcactcctgaagag
tatgcgaaaacagctggagattatattcagcaggttgccagtgatgtatatacagaatac
caaaagagattgagacgcaatcaggcgctcgatttcgatgatcttattatgatcacgatt
cagctgttccagcgggttccggaagtgctggaatattatcagagaaaattccaatatatt
catgtggatgaatatcaggacacaaacagagcccagtatatgcttgtaaagctaatggca
agccgatttaagaatctttgtgtagtcggtgactcggaccagtctatttataaatggcgc
ggtgcggacattgccaacattctttcctttgaaaaggattatcctaatgcgcaaaccatc
atgcttgaacaaaattaccgctcaacaaaaaggatcctgctggctgcgaatgaagtcatc
agcaagaacctgaacagaaagccgaaaaatctctggaccgaaaacgcagaaggcaataag
attttttactatcgtgccgatagcgaacagggagaagctcagtttgttgcaggtaaaatc
aaggaatacatcagcaccggcaagcgaagcgcttcggatatcgcgatcttataccgcacc
aatgcacaatcccgtgtaatggaggaagtgctgttaaagtcgaacatagaatattccatt
gtcggcggcatcaagttctacgaccgcaaagaaatcaaggacatccttgcttatctgcgc
ctgattgccaatccggatgatgatatcagtcttcagcgtgtaattaatgtgccaaagcga
ggaatcggctccggttcggttgataaaatcgccaactttgcacagcttcatgaaatgagt
atgtttgaagcacttgaatccattgaactgattggcttgagcccgaaaattacaaaaggg
gccattgaattcagggacctggttaaaaactatacacaaatgcaggaatacctttctgta
acagaacttgtggaagagctattggagaaatcaggctaccgtgatatgctgattgccgag
aaatccattgaagcacagagccgtctggaaaacattgatgaattcctgtccgttaccaaa
aactttgaagaagcaagcgaagacaaaacgcttatcgcatttttgactgatttggctctt
gtagctgacattgataaattggatgatgatggagaaaaagccgaatctgttgttcttatg
acacttcactcagcaaagggccttgaattccctgttgtctttttactgggtcttgaggaa
ggtgtattcccgcacagccgttctttaatggaagagtctgaaatggaagaggagcggcgc
cttgcttatgtgggaatcacgagggcagaagaggagcttttcattacgaatgctcaaatg
cgtactttattcggacgcacgaatatgaatccgccatccaggtttattaaagaaatacct
gctgatttgctggacggccttgaacctgctaaaaaaccgtctccatttggatcatcacca
tttggttctccgtctgcttcaagaggagtacagcctcagcggaaagcggtgattcgtcca
tctgcatcgaacacaggaggagacgatattgcctggaaggtcggcgacaaagcccagcac
ggaaaatggggaacaggcactgttgttagtgtgaaaggatccggcgagggaacagagctg
gatattgcgttcccaaaaccagttggcattaagcgtctgctggccaaatttgcaccgatt
acaaaggcataa
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integrated database retrieval system
