Cytobacillus firmus: NAF01_04975
Help
Entry
NAF01_04975 CDS
T08260
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
cfir
Cytobacillus firmus
Pathway
cfir02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NAF01_04975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cfir02022
]
NAF01_04975
Two-component system [BR:
cfir02022
]
NarL family
LiaS-LiaR (cell wall stress response)
NAF01_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_40
HTH_24
HTH_23
DUF6115
Motif
Other DBs
NCBI-ProteinID:
URT71821
LinkDB
All DBs
Position
942153..942785
Genome browser
AA seq
210 aa
AA seq
DB search
MIKVLFVDDHEMVRIGVSSYLTAQPDIEVIGEADNGKTAIDMALELRPDIILMDLVMKEM
DGIEATRRIIEQWPEAKIIIVTSFLDDEKVYPALEAGATSYMLKTSKASEIAEAVRSTYH
GQSVLEPEVTGKMMVKMRQKNQLLPHEELTSREMEILLLMTEGKTNQEIADELFIALKTV
KTHVSNILSKLQVQDRTQAVIYAFKHSLVK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtactttttgtggatgatcatgaaatggttcggattggagtgtcttcctat
ttgacggcacagccggatattgaggttataggagaagcggataacggaaaaacagcgatt
gatatggcacttgaattgcggccggatatcattctgatggatctagtgatgaaggaaatg
gacggaatcgaggcgaccagaagaatcatcgaacaatggccggaagctaagatcatcatt
gtgacaagcttcctggatgatgaaaaagtgtatccggctttggaagcaggggcgacaagc
tatatgctgaaaacctccaaagcaagtgaaattgctgaggcagtccgctcgacttatcat
ggacagtcagtgcttgaaccggaagtaacaggcaaaatgatggtgaaaatgaggcagaaa
aatcagctgctgccccatgaagagctgacaagccgcgagatggaaatcctccttttaatg
acagaaggcaaaacgaaccaggaaatcgccgacgagcttttcattgccttaaaaacagtc
aaaacacatgtgagcaatatactaagcaaactgcaggtgcaggacaggacccaggcggtc
atatatgcctttaagcactcgctggttaaataa
DBGET
integrated database retrieval system
