Cytobacillus firmus: NAF01_05275
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Entry
NAF01_05275 CDS
T08260
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_05275
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NAF01_05275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
KorB
Phage_CI_repr
ElaD-SseL-like_C
HTH_37
HTH_10
Sigma70_r4
HTH_7
HTH_IclR
MarR
HTH_35
Motif
Other DBs
NCBI-ProteinID:
URT71877
LinkDB
All DBs
Position
complement(1000035..1000358)
Genome browser
AA seq
107 aa
AA seq
DB search
MIGDRVKKLRQEKKMSLSELADQAGVAKSYLSSLERNLQTNPSIQFLEKIAGVLNVPVDH
LIHEQINKEDLDSEWMKIVKEAMESGVSKEQFREFLDFNKWRSGQKS
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtgatcgtgtaaaaaaacttcgtcaggaaaagaaaatgtccttatccgagctt
gcagaccaagccggtgtggcaaaatcatatttaagctcacttgagcgcaaccttcaaacc
aacccatcgattcagtttctcgagaaaatcgctggagttctgaatgtacctgtggaccat
ttgatccatgagcagatcaataaggaagatttggattcagaatggatgaagattgtgaaa
gaagcgatggaatccggggtttccaaggagcaatttcgggagtttttggattttaataag
tggagaagcggacaaaaatcataa
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integrated database retrieval system
