Cytobacillus firmus: NAF01_05405
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Entry
NAF01_05405 CDS
T08260
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAF01_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_05405
Enzymes [BR:
cfir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NAF01_05405
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NAF01_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
URT71901
LinkDB
All DBs
Position
1026518..1027399
Genome browser
AA seq
293 aa
AA seq
DB search
MIKDGFFLEKIQVEGPYNFDLVLDRLSNDPLNQVNIEERSVKVPLMLSHQPVVAEVKAIG
TTEQPEFLISGTDGPLKEKAAERLSEIFQWHLPLETIHRHFQNTELQPIFEAHYGTPIVL
DFDPYGCILKCIIHQQLNLAFAHTLTERFVKTFGFEQDGVWFYPLPEKVAELKVEDLREL
QFSGRKAEYVIGIAKEAAAGNLNFDELRNLADEEIYDKLIKLRGVGPWTVQNFLMFGLGR
PNLFPAADIGIQNALKKLYKLEAKPTLEEMETFSKSWNPYLSYASLYLWRSIE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggacggattcttcttggaaaagatacaagtagaaggaccttataattttgac
ctcgtactggacaggctttcgaacgatcctcttaatcaggttaatatagaggaaaggtct
gtgaaagtgcctctgatgctaagccatcagccggttgtggcagaagtaaaggcaatcgga
acgacggaacagccggaatttttaatttccggaacggatggcccccttaaagaaaaggca
gctgagcgcctatcggaaatatttcaatggcatctgccgcttgagaccattcacaggcat
tttcaaaacacagaattacagccgatatttgaagcgcattatggaacacctattgtgctc
gactttgatccatacggctgtatcttgaaatgcattatacatcagcagctgaaccttgcg
tttgcacacacattaacagagcggtttgtgaaaacctttggatttgaacaagacggtgtg
tggttctatccgctgcctgaaaaagtggcggaacttaaggtggaggacctgagggaactg
cagttcagcggacggaaggctgaatatgtgattggcattgcaaaagaagcggccgcggga
aatttaaactttgatgagcttagaaaccttgcagatgaagaaatttatgataaactgatc
aaattgcgcggtgtcggaccctggactgtccagaatttcttaatgttcgggcttggccgg
ccaaatctttttccggctgcagacatcggcattcaaaatgccttgaaaaaactatataaa
ttagaagcgaaaccgactctggaagagatggagacattttcaaagagctggaatccttat
ttgagctatgcttcgctttatttgtggagaagcatcgagtaa
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