Cytobacillus firmus: NAF01_06885
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Entry
NAF01_06885 CDS
T08260
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_06885 (addB)
Enzymes [BR:
cfir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAF01_06885 (addB)
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NAF01_06885 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF7658
Motif
Other DBs
NCBI-ProteinID:
URT72161
LinkDB
All DBs
Position
1304217..1307723
Genome browser
AA seq
1168 aa
AA seq
DB search
MTVRLLIGRSGSGKTEYCLNQIRDELRFNPDGDPIIYLVPEQMTFLSEYKLITTPGLGGM
IRSQVYSFTRLAWRILQETGGMSRYHLNSVGISMLIRKIIEDKKDDLKLFQRAADKNGFI
QQVEQIMTEFKRYCVAPDELAERQYQLSARGKSNKALQDKLHDLEIIYKNFEESLSGKYT
DSEDYFRLLAEKASHSEYLKNAEVYIDGFYSFTPQEYAIVEQLMKQCKNVTITLTLDQPF
KNNASDELHLFRMPGENYQTIKELASRNRLDVEEMLLSEQKRWITPSLKHLEAHFDSRPA
EAFTGEADIHIGQAVSRRAEIEGVAREINKLVRTDGYRYRDIAVLARNGQDYHDMIETVF
RDYDIPFFIDQKRTMLNHPLVELIRSTLEIINGNWRYEPIFRAIKTELIFPSRLNTGKLR
EQMDRLENYVLAYGIQGDKWTKKKRWTYRRIRGLEFEAVAQTDAEKKVEDELNDLREMIT
GPIVRLHRRLRKAADGRSLCEALFLYMEELDVPLKIEKWKTAQEDKGNLVKSREHGQAWN
SIMELLDQYVEMLGEEEVSLKRFASILDAGLESLRFTLVPPAIDQVMAADLERSRLTDIK
AAFVIGLNEGVLPAKFSEDGVLADDDREMLNTNGMKLAPGSRTRLLDEEFIAYKAFVTPS
EKLYISYPLANEEGKALMPSPYFKRLGDLFPDCRHHSFMSDPAELPETEQLEYADNLNTA
LSYLTSQLQLKKRSYPIYDLWWDVYNYYLKNEQWRRPALKVLSSLNYENRTLQLGEDVSK
ELYGDHIQASVSRMELFHSCPFSHFAQHGLRLRERQVYRLEAPDIGDLFHAALKFIAETV
MTQKLSWTDMTREQCEILAKEAVEMLAPKLQNEILLSSNRHHYIKRKLEQIISRASYVIS
EHAKSSGFSPVGLELGFGPKGELPSLAFPLKNGAKMELVGRIDRVDKAQDANGTFLRVID
YKSSSKDLNVSEVYYGIALQMLTYLDIIIAHSSSLIGTKADPAGVLYFHVHNPIVSTSKM
LTLEDIEQELYKKFKMNGLLLGEENVIKLMDQTIETGDSSIISAGFKKDGTLSKRSKVAS
KQEFDYLRRYVRKMYRHTGNKITEGNVDIAPYKMKEKTPCTFCAYKSVCQFDESLETNDY
RLFTPKPKEDMIEIIKKEVEGDENDHTA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgtttattgataggccgttccgggagcggtaaaacggaatactgccttaac
caaatccgtgatgaactgcggtttaatccggatggagatccaatcatttatttagtgccg
gaacaaatgacgttcctttcagaatataaattaattacaacacctggccttggcggaatg
atccgcagtcaggtatactctttcacgcgtcttgcctggagaattcttcaggaaacggga
ggcatgagcagataccatcttaatagtgtaggcatcagcatgctaatccgcaaaatcatt
gaagataaaaaggatgatcttaagctttttcaaagggctgcagacaaaaatggctttatt
cagcaagtagaacaaataatgaccgaattcaaacgatattgtgtagctcccgacgaactg
gcagaaaggcaatatcagctctcggcaagggggaagtcaaataaggcactccaggataag
ctgcatgatcttgagataatctataaaaattttgaggaatccctttctggcaaatataca
gattccgaggattatttccgcctgcttgcggaaaaagcctcccattcagagtatctaaaa
aatgccgaggtttatatagatgggttttacagctttacaccacaggaatatgcaattgtt
gaacagctgatgaagcagtgtaaaaacgtcacaatcacattaacgcttgaccagccgttt
aagaataatgcttctgatgagcttcatttattcagaatgccgggagagaactatcagaca
atcaaagaattggcttcccgcaacaggctggatgtggaagagatgctcctttccgagcaa
aaaaggtggatcacgccttcacttaagcatcttgaggcacattttgacagcaggcctgca
gaggcatttacaggggaagcggacattcacattggacaggctgtcagcaggagagccgaa
attgagggcgttgccagggaaattaacaagcttgttcgcacagatggctatcgctaccgt
gatattgccgtactggcaagaaatggccaggattatcatgacatgattgaaacagtgttc
cgtgactatgatatcccattttttattgatcagaaaagaaccatgctgaatcacccgctc
gttgagttaatccggtcaacacttgagataatcaatgggaattggcgctatgaaccgatt
ttcagagctataaaaacagagctgatttttccgtccagattaaacaccggaaagcttcgt
gagcaaatggacagacttgagaactatgttcttgcctatggcattcaaggagacaaatgg
acgaagaagaagagatggacatacagaagaatcagggggctcgagtttgaagcagttgcc
cagactgatgccgagaaaaaagtagaagatgagttaaatgatctgcgcgaaatgattaca
ggcccaatagtaaggctgcacaggcgcttaagaaaggctgctgatggccgcagcttgtgt
gaagctttattcttatacatggaagaattggatgttcctctgaagattgaaaagtggaaa
actgctcaggaggataaagggaaccttgttaagtcaagggaacatggacaagcatggaat
tccattatggagcttctggatcaatatgtggaaatgcttggtgaagaagaagtgagcctt
aagcgttttgcatccattcttgatgccggattggagtcgcttcgctttacgcttgttccg
cctgccattgatcaggtcatggcggccgatttggaaagatcaaggctaaccgatattaaa
gctgcttttgtcattgggcttaatgaaggagtacttcctgccaaattctcggaggatggt
gtgctggcggatgacgacagggaaatgctgaacacgaacggaatgaaactggcgccggga
agccgcacacgtctgcttgatgaggaatttatagcttataaagcgtttgttactccatca
gaaaaactttatatcagctacccattggcaaatgaagaaggtaaagcacttatgccgtct
ccttattttaaaagattgggagatttatttcctgattgcaggcatcattccttcatgtct
gatccggcagagctgccggaaacagagcagctggagtatgctgataaccttaatacagca
ttatcgtatttgacttcacagcttcagctcaaaaaacgcagctatccaatctatgacctt
tggtgggatgtttataactattaccttaaaaatgagcagtggagaaggcctgcattgaag
gtgctttccagccttaattatgaaaacaggacacttcagcttggtgaggacgtcagtaag
gaattatatggcgaccatattcaggcgagtgtttcgagaatggaattattccatagctgt
ccattttcccattttgcacagcatggactaaggctgcgggaaagacaggtataccgcctg
gaggcaccggatatcggggatcttttccatgctgctttaaaatttattgcagaaacagtt
atgactcagaaactttcatggacagatatgacgagggaacagtgtgagatccttgcaaaa
gaagcagttgaaatgcttgctcctaaacttcaaaatgaaattctcttaagctcgaacagg
catcactatattaagagaaagcttgagcaaattatcagcagggcttcctatgtcatcagc
gagcatgccaaatcaagcggattctcgccggtgggccttgaactggggtttgggccgaaa
ggagagcttccttcgcttgcttttcctcttaaaaacggggctaaaatggagcttgtcgga
agaattgacagagtagacaaggctcaggatgccaacgggacatttttacgggtaattgac
tataaatccagctccaaggatctgaatgtaagtgaggtttactatggcattgctctgcag
atgctgacatatctggacatcattattgcccattccagctctttaattggaacaaaagcc
gatccggcaggagtcctttacttccatgtccataatccaatcgtcagcacatcaaaaatg
ctgacattggaggatatcgaacaggaactctataagaaattcaaaatgaatggcctcctg
cttggagaagaaaatgtaatcaagttaatggaccagactattgagacaggcgactcatcc
attatttcagcggggttcaaaaaggacggcaccctttcgaagcggtctaaagtggcaagc
aagcaggagtttgattatttgcgccgctatgtaagaaagatgtataggcatacaggcaat
aagattacagagggcaatgttgatattgccccatataaaatgaaggaaaaaacaccatgt
acattttgcgcctataaatctgtatgccaatttgatgaatctcttgaaacaaatgattac
agattatttactcctaagccaaaagaagacatgattgaaatcatcaagaaggaggtggag
ggagatgaaaatgaccataccgcctaa
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