Cytobacillus firmus: NAF01_07400
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Entry
NAF01_07400 CDS
T08260
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03420
Nucleotide excision repair
cfir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAF01_07400
03430 Mismatch repair
NAF01_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_07400
Enzymes [BR:
cfir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAF01_07400
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAF01_07400
MMR (mismatch excision repair)
Other MMR factors
NAF01_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
CoiA
AAA_14
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
URT72260
LinkDB
All DBs
Position
complement(1413319..1415637)
Genome browser
AA seq
772 aa
AA seq
DB search
MKTAKLHNKTVNLEQLNRESFQHIYEEGKKGKLFCPECGASVRLYLGILDEPHFYHIHQD
SRTCRDIILNPEPVQTENEEYIERNGFKIPVSGSIASVAIKETESAFKKAQPVKNIPPYR
KEGTASPSFPDEYLKSLLQAGVFLDKQQAAAVSHLDGPLLVLAGAGSGKTRVLTTRTAFM
LREKNIDPKSIMLVTFTAKAAAEMKERLIQYPGMDSRKVRQIVSGTFHSLFYRILSFHNP
NKWTSGKLLNKEWQREQIIKESSKDLKLDEKEFAFDLALQQISYWKNSLIVPGKVNPKND
WEEQTAILYQRYEQTKTKKELFDFDDMLTGCHALFLEEPEILEQYQNRFHYFLIDEFQDI
NNVQYELMKMLSDRTKNVCAVGDDDQSIYAFRGSDPQYLLDFEKDFPGAKVITLNQNYRS
AHEIVSAANKIISLNKFRRPKSMSAQFSGGQHPFLFFPYDEEEEATMILTDIREKIEEGY
EPGDFAVLFRTHTGSRAIFERLANSSLPFKLDQDAESFYDRFIVRSMLAFLKLSVNEDDQ
NALKDMLPSLFIKQSVLQDIKAESILQDCSLLESLKFIKTGFAFQESKLKKVIPVTRSIS
GLTPTTAIETVEKELGFQDFIKKRGNEGNKMDKGSDDIKDLKVAARNFQSLQEFLEHTEH
MKAMNKEIKRLSRNNDNAVTLSTIHRAKGLEYNVVYVAGAVEGNLPHDHALEAYRSGESA
PLEEERRLMYVAVTRARKDLYISVPEKRRGRKAYPSRFLAPITRSGRNKDEK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcaaagttacataataagactgtgaatctggaacaattgaacagagaaagt
tttcagcatatttatgaagaaggcaaaaaaggaaagctgttctgccctgaatgcggagct
tctgtccgtttgtatttgggaattcttgatgaacctcatttttatcatattcatcaagac
agcagaacgtgcagagatataattcttaaccccgaaccagtccagactgagaatgaagaa
tatatagaaagaaatgggtttaaaattcctgtttcggggtcaattgcttcagtcgcaata
aaggaaaccgaatcagcctttaaaaaagctcagccggtaaaaaatatccccccctataga
aaagaaggtactgccagtcccagtttccctgatgaatacctaaagtcccttttacaggca
ggtgtattcttggataaacagcaggcagcggctgtgtctcatttagatggcccgctgctc
gttctggcaggtgcaggcagcggcaaaacccgtgttttaacaacacggactgcttttatg
cttcgcgagaaaaatatcgaccctaaatccattatgcttgttacatttacagctaaggct
gctgctgaaatgaaggagcgtcttatccaataccccggaatggattcccgaaaggttagg
caaatcgtttcaggcacttttcacagtttattctatcggatactttccttccacaatccc
aataaatggacttcaggaaagctccttaataaagaatggcaacgggaacagattattaaa
gaatccagcaaagacttaaaactcgatgaaaaggaatttgcctttgatcttgccctccag
caaatcagctattggaaaaattctcttatcgtacctggcaaggttaacccaaagaatgat
tgggaggaacaaactgcgattctttatcaaaggtatgaacaaactaaaacaaaaaaagaa
ttatttgatttcgatgatatgctcacaggctgccatgccctttttctggaagaacctgag
attctggaacaatatcaaaaccgctttcattatttcctgattgatgaattccaggatatt
aataatgttcaatatgagctaatgaaaatgctgtctgatagaactaaaaatgtctgtgcc
gtgggagacgatgatcaatctatatatgccttcagaggaagcgatccccagtatcttttg
gatttcgagaaagatttccctggtgccaaggtaataacattgaatcagaattatcgctct
gctcatgagattgtatcagctgctaacaaaattatttctctgaataaatttagacgcccc
aaaagcatgagtgctcaattttccggtggacagcaccccttcctcttttttccttatgat
gaggaagaagaagctacgatgatcctgactgatatccgggaaaaaattgaagaaggatat
gaaccgggggattttgcagtattattccgtacccataccgggagcagagccatttttgag
cggctggctaattccagccttccttttaaattggatcaagatgccgaatcattttatgat
cgatttattgttcgaagcatgcttgcttttctaaagctatcggtaaatgaggatgaccaa
aatgctttaaaggatatgctgccttcattgtttattaaacaatccgtccttcaggatatt
aaggcagaaagcatcttacaggattgctcattgctggagagcctgaagtttataaaaaca
ggctttgcttttcaggaaagcaaattgaaaaaagtgatccctgttacaagatcaatctca
gggcttactccaaccaccgcaattgaaacggttgaaaaagaattgggatttcaggacttt
ataaaaaaacgaggcaatgaaggcaataaaatggataaaggctctgatgatataaaagat
ttgaaggtcgctgcacgtaatttccagtctcttcaagagtttctggagcatactgaacat
atgaaagccatgaacaaagaaatcaagcgcctaagcagaaataatgataatgccgttaca
ttaagcactatccaccgtgcaaaagggcttgaatataatgtggtatatgtggccggtgca
gttgaaggaaaccttccgcatgaccatgctttggaagcttaccgttcaggtgagtctgcc
cctttagaggaagaaagaagattaatgtatgttgctgtaacaagggccaggaaggatttg
tatatatctgttccggaaaaaaggcgtggacggaaggcatatccatcaaggttccttgcc
cccatcacaagaagcggcagaaacaaagacgaaaaataa
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