Cytobacillus firmus: NAF01_08320
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Entry
NAF01_08320 CDS
T08260
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00010
Glycolysis / Gluconeogenesis
cfir00020
Citrate cycle (TCA cycle)
cfir00260
Glycine, serine and threonine metabolism
cfir00280
Valine, leucine and isoleucine degradation
cfir00310
Lysine degradation
cfir00380
Tryptophan metabolism
cfir00620
Pyruvate metabolism
cfir00630
Glyoxylate and dicarboxylate metabolism
cfir00640
Propanoate metabolism
cfir00670
One carbon pool by folate
cfir00785
Lipoic acid metabolism
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01120
Microbial metabolism in diverse environments
cfir01200
Carbon metabolism
cfir01210
2-Oxocarboxylic acid metabolism
cfir01240
Biosynthesis of cofactors
Module
cfir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cfir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cfir_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cfir_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NAF01_08320 (lpdA)
00020 Citrate cycle (TCA cycle)
NAF01_08320 (lpdA)
00620 Pyruvate metabolism
NAF01_08320 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NAF01_08320 (lpdA)
00640 Propanoate metabolism
NAF01_08320 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NAF01_08320 (lpdA)
00280 Valine, leucine and isoleucine degradation
NAF01_08320 (lpdA)
00310 Lysine degradation
NAF01_08320 (lpdA)
00380 Tryptophan metabolism
NAF01_08320 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NAF01_08320 (lpdA)
00670 One carbon pool by folate
NAF01_08320 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfir04147
]
NAF01_08320 (lpdA)
Enzymes [BR:
cfir01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NAF01_08320 (lpdA)
Exosome [BR:
cfir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NAF01_08320 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
NAD_binding_8
DAO
FAD_binding_3
3HCDH_N
Thi4
DUF2713
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
URT72432
LinkDB
All DBs
Position
1596581..1597990
Genome browser
AA seq
469 aa
AA seq
DB search
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKANMGGVCLNVGCIPSKALIA
AGHRYENAKHSDVMGITAENVKVDFTKVQEFKSGVVKKLTGGVEGLLKGNKVDIVRGEAY
FVDGNTLRVMDENSAQTYTFKNAIIATGSRPIELPTFKFSKRVLDSTGALALQEIPEKIV
VIGGGVIGIELGGAYANFGSQVTILEGADDILIGFEKQMSSLVKRNLKKKGVEFITKALA
KGVEENENGVTVKFEEKGEEKSLDADYVFVMVGRRPNTDELGLEQAGVKMTERGVIEIDK
QCRTSVSNIYAIGDIVAGPQLAHKASYEGKIAAEAIAGHNAEIDYLAIPAVVFSEPELAS
VGYTEQQAKEEGIEVTAAKFPFAANGRALALDSTDGFLKLVTRKEDGLVIGAQIAGASAS
DMIAELGLAIEAGMTAEDLAMTIHAHPTLGEITMEAAEVAIGSPIHVVK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagatttcccaatcgaaacagatactatagtcatcggtgcgggtccaggg
ggatacgttgcagcaattcgtgcagcacagcttggacaaaaagttacaatcgtagaaaaa
gcaaatatgggcggagtttgcttaaacgttggatgtattccttcaaaagctttaatcgca
gcaggccaccgctacgaaaatgctaagcactcagatgtaatgggaattacagctgaaaac
gtaaaggttgactttacaaaagttcaagaattcaaatccggtgtagtcaagaagcttaca
ggcggagtggaaggactattaaagggaaataaagttgacatcgtgcgcggtgaagcatac
tttgttgatggtaatacccttcgtgtaatggatgaaaattcagcacaaacttacacattc
aaaaatgcaattattgcaacaggatcccgtccaattgaattgccgacgtttaaattctct
aaacgtgttcttgattcaacaggcgcccttgctcttcaggaaattccagagaaaatcgtc
gttatcggcggcggtgttatcggaatcgagcttggaggagcatatgcgaactttggttca
caagtaacgattctcgagggtgcagatgatattctaatcggctttgagaagcaaatgtca
tctcttgttaaacgcaacctgaagaaaaaaggcgttgaattcattacgaaggcacttgct
aagggtgttgaagagaatgaaaatggagttaccgttaagtttgaagaaaaaggcgaagag
aagtctcttgacgcagattatgtatttgtaatggtcggaagacgtccaaatacagacgaa
cttggcttagagcaagccggcgttaagatgactgaacgcggtgttattgaaattgataaa
caatgccgtactagtgtgagcaatatttatgcgattggtgacattgttgcaggtcctcaa
ttagctcataaagcttcttatgaaggcaagattgcagctgaagcaattgcaggccataac
gctgaaattgattacttggctatccctgcggttgtattctctgagcctgaattagcttct
gtaggctatactgagcagcaggctaaagaagaaggaatcgaagtaacagcagcgaagttc
ccatttgcagctaacggccgtgcccttgcacttgattccactgacggattcttaaagctt
gtgacacgcaaagaagatggacttgtaattggtgcgcaaatcgccggtgctagtgcatct
gatatgattgcagagcttggattggctattgaagcaggcatgactgcagaagatcttgca
atgactattcacgcacatcctacattgggtgaaatcacaatggaagcagcagaagttgct
attggaagcccaattcacgttgtaaaataa
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