Cytobacillus firmus: NAF01_08680
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Entry
NAF01_08680 CDS
T08260
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cfir
Cytobacillus firmus
Pathway
cfir00550
Peptidoglycan biosynthesis
cfir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NAF01_08680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
NAF01_08680
Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NAF01_08680
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
URT72501
LinkDB
All DBs
Position
1662510..1664426
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AA seq
638 aa
AA seq
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MRVSNVTVRKRLTAALFVGILVFFIIDLRLGYVQFFLGNMLTDGAKELWSRDIPFEPERG
EIVDRNGVPLATNVSAPTVYVVPRQIKDPADAAEKLAAVLNMPKEKAYELITKRASSVKI
PQGRKISHEKAKEIRALGIEGVYIGEDSKRHYPFGNYLSHVLGFAGIDNQGLMGLELYYD
EKLKGKKGSVKFYANAKGERMNDMADDYKPPVDGMDLKLTIDSKIQTIVERELDIAQAEY
NPDGIIAIAMNPNNGEVLAMSSRPDFDPANFKNVPPEIYNRNLPIWSTYEPGSTFKIITL
AAALEEGKVNLEKDHFHDPGSVEVGGARLRCWKKGGHGSQTYLEVVQNSCNPGFVELGER
LGKESLFKYIRDFGFGEKTGIDLQGEGKGILFNLDRVGPVEQATTAFGQGVSVTPIQQVA
AISAAVNGGTLYTPYIAKELINPATGEVLMKKSPDAKRKVISKETSDEIRKALESVVAKG
SGKKAFVDGYRVGGKTGTAQKAQNGRYLENNHIVSFIGFAPADDPQLVVYVAVDNPKGTV
QFGGVVAAPIVGEIMGDSLRAMGVKPRKDQIEKELTWMDSPMIEVPDMVGLTKKDLGELY
LNLKIDASGTGNTVVKQTPQPGIKLKEGSTIRLYFDDK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttcaaatgtaaccgttcgaaaacggctgactgcagcgttgtttgttggtatt
ctcgttttttttataattgatttgcgtctgggatatgttcagttttttctggggaatatg
cttacagatggcgcaaaggagctctggagcagagatatccccttcgagccggaaagagga
gaaatcgttgaccgaaatggtgttccgctggcaacgaatgtcagtgctccaactgtctat
gttgtacccagacaaatcaaggatcctgcagatgctgcagagaaattggctgcagtactg
aatatgccaaaagaaaaagcctatgagcttatcaccaaaagggcatcaagtgtgaagatt
cctcaaggcagaaagatttcccatgaaaaagcgaaagaaatccgtgcattgggtattgaa
ggagtttacattggtgaagattcaaaacgccattatccttttggtaattacctatcgcat
gttctggggtttgcgggaattgataatcagggtcttatgggccttgagttatattatgat
gaaaagctaaaagggaaaaagggatctgttaagttttatgcgaatgcaaagggagagcgg
atgaacgatatggcggatgactataagccgccggttgatggaatggatttaaagcttacc
atcgattcaaagatacagactattgtagaaagggagcttgatatagctcaggcggaatat
aaccctgatggaataattgcaattgccatgaatccaaataatggagaggttcttgccatg
tccagcagaccggattttgaccccgcgaattttaaaaatgttcctccggagatctacaac
cgcaatctgccgatatggagtacatacgagccaggttccacatttaaaatcattactctg
gcagctgcattggaagagggaaaggtaaatttggaaaaggatcatttccacgacccggga
tctgttgaagttggcggtgccagactgagatgctggaaaaagggtggacatggcagtcag
acttatcttgaagtagtacagaattcctgcaaccccggctttgtagagctgggtgagaga
ttaggcaaagagtcactatttaaatatattcgcgacttcgggttcggcgaaaagaccggc
atcgaccttcagggcgaggggaaagggattctatttaatctcgatcgggttggtccagtc
gagcaggcaaccactgcttttggtcagggggtttccgttaccccgattcagcaggtagca
gccatttcagctgcggttaatggcggaacattgtatacgccttatatagcaaaagagctt
ataaatccggctactggtgaagtattgatgaaaaaatcgcctgatgcaaaaagaaaagta
atttcaaaggaaacatctgatgaaatccgcaaagcgcttgaatcagttgtggcaaaagga
tcaggaaaaaaagcgttcgttgacggatatcgtgttggggggaaaaccgggactgcacaa
aaagcccaaaatggccggtacctggaaaataaccatatcgtatcattcatagggtttgca
cctgctgatgatcctcagctcgtcgtgtatgtggctgtggataatccaaaaggaaccgtt
caatttgggggtgttgttgccgctccgattgtaggagaaatcatgggggacagtttgcgg
gcaatgggtgtaaagcctcgcaaagatcaaattgaaaaagagctgacatggatggattcc
ccgatgattgaggttccggatatggtaggtctgacaaagaaagacctcggtgaactatat
ctaaacctgaaaattgatgccagcgggacaggaaatacggtggtgaagcaaacgcctcag
ccgggcattaagttaaaagaaggttcaacgatccgcctttattttgatgacaaataa
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