Cytobacillus firmus: NAF01_08700
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Entry
NAF01_08700 CDS
T08260
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00470
D-Amino acid metabolism
cfir00550
Peptidoglycan biosynthesis
cfir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NAF01_08700 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NAF01_08700 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
NAF01_08700 (murD)
Enzymes [BR:
cfir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NAF01_08700 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
Precursor biosynthesis
Amino acid ligase
NAF01_08700 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
URT72505
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All DBs
Position
1667701..1669053
Genome browser
AA seq
450 aa
AA seq
DB search
MKEVNRYRHKKILVLGLAKSGVSAASLLHKLGAFVTVNDYKPLAENPEAQGLLEQGITVI
CGGHPIELLEEGFELIVKNPGIPYHNPMIKGALEKGIPVITEVELAYQVSEAPFIAITGT
NGKTTTTTLVFEMLQAGSKMPLIAGNIGTVASEVAQNAAEENNIVIELSSFQLMGIQDFR
PRIAILTNLYDAHLDYHGTREEYHAAKANITLNQTEQDYFIVNADQDKVMEAAALSKAQI
IPFSTSKVLSEGAYVKDGWIYFNDEQVMERKDVSLPGEHNLENILSSVAAAKLTGVGNEA
ISRVLGSFTGVKHRLQYVGEHQNRKFYNDSKATNILATKNAVAAFDQPVLLLAGGLDRGN
SFDELIPSLKKVKALVTFGQTAEKIEKAAMEAGIKTIERVDNVEKAVPAAFKLSEPGDVI
LLSPACASWDQYKTFEVRGDMFIDAVHKLS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaagtcaatcgctatcgacataagaaaatattagtactggggctggcgaaaagc
ggagtgagtgcagcttcccttttacataagcttggagcatttgtgactgttaatgattat
aagccgcttgcagaaaatcctgaagcacaaggactgcttgagcaggggattacagttatt
tgcggtggccatcccattgaacttcttgaagaaggatttgaactgattgtaaaaaatccc
ggtataccttatcataatccaatgataaaaggagcccttgaaaagggcataccggttatt
acagaagtggagcttgcctatcaggtttctgaagctccttttattgcgattactggcaca
aatggaaaaacgacaaccactacacttgtgtttgaaatgcttcaggcagggagcaagatg
ccgctgatagctggaaatattggtacagtagcttccgaagttgcccagaatgccgcggaa
gaaaacaatatcgtaattgagctttcatcgtttcagctgatgggtattcaggatttcagg
ccgagaattgccattttaaccaatttatatgatgcccatttggattaccatggcacaaga
gaagaataccatgcagccaaagcaaacattacgctgaatcagactgaacaggattatttc
attgtcaatgccgaccaggataaagtaatggaagcggctgccctgtcaaaggctcagatc
attcctttttcgacttccaaagtgctgtctgaaggtgcatatgtgaaagatggctggatt
tattttaatgatgaacaagtgatggaaagaaaggatgtatcattgccaggagagcacaac
cttgaaaatatcctttcctcagtggctgctgccaagctgacaggggtgggcaatgaagcc
atcagccgggttctgggatcgtttacaggtgtaaagcaccgcctgcaatatgttggagaa
catcaaaacagaaaattttataatgattctaaagcaacgaacatccttgcaacgaagaat
gcggtcgcagcatttgatcagcctgttcttcttcttgcaggaggtctcgaccgcggaaat
agctttgatgaactcattccatctcttaaaaaggtaaaggctctggtaacctttgggcaa
actgctgaaaagattgaaaaagcagcaatggaagcgggaataaaaacaattgagcgtgtc
gataatgttgaaaaagccgtacctgcagcctttaagctttcggagccgggagatgtgatt
ctgctttcccctgcctgtgcaagctgggaccaatataaaacttttgaggttcggggagac
atgtttatagatgcggtgcataaacttagttaa
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