Cytobacillus firmus: NAF01_09015
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Entry
NAF01_09015 CDS
T08260
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfir03019
]
NAF01_09015 (rnc)
03009 Ribosome biogenesis [BR:
cfir03009
]
NAF01_09015 (rnc)
03036 Chromosome and associated proteins [BR:
cfir03036
]
NAF01_09015 (rnc)
Enzymes [BR:
cfir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NAF01_09015 (rnc)
Messenger RNA biogenesis [BR:
cfir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NAF01_09015 (rnc)
Ribosome biogenesis [BR:
cfir03009
]
Eukaryotic type
90S particles
RNase
NAF01_09015 (rnc)
Prokaryotic type
rRNA processing factors
NAF01_09015 (rnc)
Chromosome and associated proteins [BR:
cfir03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NAF01_09015 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
URT72563
LinkDB
All DBs
Position
1733948..1734688
Genome browser
AA seq
246 aa
AA seq
DB search
MRSNKDKERKSFRAIEKQFKEFQTEIGIHFENEKLLKQAFTHSSYVNEHRRKPYEDNERL
EFLGDAVLELTVSKFLYLKYPMMSEGELTKLRAAVVCEPSLVSFAHELSFGSLVLLGKGE
EMTGGRTRPALLADVFEAFIGALYLDKGLDTVVGFLEKVVFPKIDSGAFSHVMDFKSQLQ
ELVQRDGAGAIEYKILQEKGPAHNREFVSTVSLNGRELGTGTGRSKKEAEQHAAQMALEV
LKNHIK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcaataaagataaagaaagaaaatcatttcgcgcaatcgaaaaacaatttaaa
gaattccagacggaaatcggaattcactttgaaaatgaaaaattactaaaacaagctttt
acccattcatcctatgtgaatgagcaccggagaaagccttatgaagacaatgaaagactg
gaattcctgggggatgccgtccttgaactgactgtttcaaaattcctttaccttaaatat
ccgatgatgagcgagggtgaattaacaaagctgagggctgcggttgtctgcgaaccatcc
ctggtctcatttgcccacgaattgtcatttggcagcctggtgctccttggtaaaggggag
gaaatgacaggtggaagaacccgtccggccctgcttgcagatgtttttgaagcctttata
ggtgcattgtacctggataaaggattagatacagttgtcggttttttggaaaaagttgtt
tttccaaagattgattcaggtgctttttcgcatgtgatggattttaaaagccagctgcag
gagcttgtgcagcgggatggagcaggtgcaattgaatataaaatccttcaggaaaagggg
cctgcccacaatcgtgaatttgtttccactgtttctctaaatggcagggaacttgggaca
ggcactggccggtcaaagaaagaagccgaacaacatgcggcccaaatggctcttgaagta
ttaaaaaatcatataaagtga
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