Cytobacillus firmus: NAF01_09880
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Entry
NAF01_09880 CDS
T08260
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfir03016
]
NAF01_09880
Enzymes [BR:
cfir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NAF01_09880
Transfer RNA biogenesis [BR:
cfir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NAF01_09880
Prokaryotic type
NAF01_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
URT72727
LinkDB
All DBs
Position
1916901..1917641
Genome browser
AA seq
246 aa
AA seq
DB search
MDIRFLGTGSAYPGSERDNTSICFSNAGYHVLVDVSGNPCRKLKQMKVDLGELDAVLFTH
FHIDHIYGLPSLLWGMWLENRKKPLRLFCDYRNEKKLYEWVATMEADKWPIAFPIEVETF
DGDQEEQLLSGGGMTFTCFKALHSVPTVGLEVRCAGRVVVYSGDTEINTRIGQYDHIDLL
IHEATFARKVAGNHCSLVEVVNKYDMDKVGEVVFVHLSDNELYEEEAAKFCNSKIVIGED
LMTKRL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgttttttgggaacgggaagtgcctatcccggttccgaacgcgacaatacg
tcaatttgtttttcgaatgccggttatcatgtcctggtcgatgtcagcgggaatccttgc
aggaagctgaagcagatgaaggtggatttaggtgagctcgatgcagtgttgttcacccat
tttcatatcgaccatatttatgggctgccgtcattgctatggggaatgtggctggaaaat
aggaaaaagcctttacggcttttttgtgattaccgtaatgagaaaaagctttacgaatgg
gtggcaacaatggaggctgacaagtggccaattgcatttcccattgaggtggaaacattt
gatggtgatcaggaagagcagctgctgtcaggaggcgggatgacgttcacctgttttaag
gcacttcattctgttcctactgttgggctggaggtacgatgcgctggtcgagtagtcgtt
tattcaggtgatacagaaatcaacactcgaattggacagtatgaccatatagatctgtta
attcatgaagcgacatttgcccgtaaagtggcaggtaaccactgcagtcttgttgaggtt
gtaaataagtatgatatggataaggtcggtgaagtcgtattcgtccacttatccgataac
gaactgtatgaagaagaggctgcaaagttctgcaattcgaagattgtcattggtgaggac
ctaatgacaaaaagactataa
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