Cytobacillus firmus: NAF01_10240
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Entry
NAF01_10240 CDS
T08260
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
cfir
Cytobacillus firmus
Pathway
cfir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NAF01_10240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_10240
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NAF01_10240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
RapH_N
HTH_31
TPR_10
TPR_2
TPR_12
TPR_1
Motif
Other DBs
NCBI-ProteinID:
URT72793
LinkDB
All DBs
Position
2002391..2003638
Genome browser
AA seq
415 aa
AA seq
DB search
MIIGKIIKFYREREGLTQGQLGEGICSVTHLSKIERGITEYSGEITQLLARRLGINHEEE
ILRYHRLAKRLNEWHESMIMQRIQESEKIKEEVQVEKLIHMPDFQTLYRLLSARYYLSVN
DLISASELISDLTKASAPFSPHDANLLKHIQGIYYFLTGQYRDCISCLASIDREQYSYEE
YYYHLAIAYHSIHSNITAYYYGKKALQYFQRTLNILRIIDTEMLLIVQLNAKELHDFHET
KEKYEQLIKLCDACNSGDRKSKLYHNLAFEYFRRKKYRESAGLYEEALKLTAENSPHYLT
ALDGYIHTCYKGKLKSRNKLIKLAEEGLERAKAGDSYTWIYFQLHLHLLKNEEQHYYQFI
EETALPYFKNIGYGILIDHYEKKLFHFYSKKGDAQKAIELARSFIHKQKSYYDHD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgggaaaataattaagttttacagggaaagagaaggtctaactcagggtcag
ctgggggaagggatttgttctgtaacccatttgagtaaaattgaacgcggaattaccgaa
tactccggagaaataacacagcttctggccaggaggctcggcattaatcacgaagaggaa
attcttcgatatcatcggcttgcaaagaggctgaatgaatggcatgagagcatgatcatg
cagcgaatacaggaatctgaaaagataaaagaggaagtgcaggttgaaaaactgattcat
atgcctgactttcaaactctatatcgcctgctgtcagccagatactatttatctgtgaac
gatttgatttcagcatcagaattaatctctgatcttaccaaagcttccgctcccttttca
ccccatgatgctaatctgctgaagcatatccagggcatttattactttcttacagggcaa
taccgtgactgtatcagctgtttagcttccattgacagagaacagtatagctacgaagaa
tactattaccatttagcgattgcttaccactcaatccattccaatatcacagcctattat
tatggcaaaaaggctcttcaatattttcaaagaaccttaaacattctccgcattattgat
acagaaatgctgcttattgttcagttaaatgcgaaggaacttcatgattttcatgaaacg
aaggagaaatatgaacagctaataaaactttgtgatgcatgtaattcaggtgatcgtaaa
tccaagctttatcataatctggcatttgaatattttcgccggaagaaatatcgggaatca
gccggtctctatgaagaagcactaaagcttaccgctgaaaactcccctcactatctgact
gctttggacggatatatccatacctgttataaagggaaactcaagtcccgaaataagtta
ataaaattagctgaagaaggcttggagagggcaaaagcgggtgattcatatacctggatt
tattttcagctacatcttcatctattgaaaaatgaagaacagcattactatcaatttatt
gaagaaacagcactgccatactttaaaaatattggctacggcattttaatcgaccactat
gagaaaaagctttttcacttttactcaaaaaaaggcgatgctcaaaaggcaattgaactc
gcccgttcgtttatacataaacaaaaaagctattatgatcatgattaa
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