Cytobacillus firmus: NAF01_10540
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Entry
NAF01_10540 CDS
T08260
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_10540
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NAF01_10540
Archaeal homologous recombinant proteins
NAF01_10540
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
DNA_pol_E_B
Med13_N
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
URT72850
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Position
2066246..2067391
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AA seq
381 aa
AA seq
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MKFIHTADWHLGKLVHGVYMTEDQRHFLNQFIDVVEEEKPDAVVIAGDLYDRSVPPTDAV
ELLNEILFKINVELNTPVVAIGGNHDSAERLSFGSSWYKQSKFYLSGKLSNDFKPVHING
VNFFLVPYAEPGMVRHLLDDDRVHSHDDAMKAIVSRIEKDLNHNEPNVLVGHAFVLGGST
SDSERTLSVGGTGCVHSSSFDPFSYTALGHLHSPDAIKHEKIRYSGSLLKYSFSEAKQEK
SISIIEMKENGEFDLRTRSLKPQKDLREIEGHLDELMDPAFYEKQNLDDYLKITLFDEGA
LLDPINKLRQVYPNVLHLERRIAVTDLKKKSSFLSMKEEKKSELDLFKQFYEQMTTSEFT
EDKQQVMTDVIEKVLREEALK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacagctgattggcatttgggcaagctggtccatggtgtatatatg
accgaagatcagcgccattttttgaatcaatttattgatgtggtagaagaagaaaagccg
gatgcagtcgtaattgcaggagatttatatgaccggtccgtacctcccactgatgctgta
gaattgctgaatgaaattctttttaaaataaatgtagagcttaatacacctgtggttgcc
ataggaggaaaccatgacagtgcagagaggctgtcatttggaagctcctggtataagcaa
agcaagttctacttgtctggaaaactgtcaaatgattttaagcccgtacatattaatggt
gtgaacttttttctggttccgtatgctgaacccggaatggtcaggcatttgcttgatgat
gaccgtgtacactcccatgatgatgcaatgaaggcaattgtgagcagaattgaaaaggac
ctgaatcataatgaaccgaacgttcttgtaggacatgcttttgtcctgggtggttctacc
agtgattcggagaggaccctttcagtcggcggaacaggctgtgtccattcaagttccttt
gatcctttctcttatacagcactggggcatttgcatagtcctgatgccataaagcatgaa
aaaattcggtattctggctccctcttaaaatattctttttcagaagccaaacaggaaaaa
tcgatttcaattatagaaatgaaggaaaatggcgaatttgatttgcgtacccgttcactg
aagccccaaaaagacttgagagaaatcgaagggcatttagatgaattgatggatccagca
ttctatgaaaaacagaatcttgatgactacctgaaaatcaccctttttgatgaaggcgca
ttgcttgatccaattaataagctgagacaggtctacccgaatgttcttcatctggaaaga
agaattgccgttacagatttgaagaaaaaaagctcattcttatcgatgaaggaagagaaa
aagtcggagcttgatctgtttaaacaattctatgaacaaatgactacttctgagtttaca
gaagataaacagcaagtaatgacggatgtgattgaaaaagtgcttagggaggaggccctg
aaatga
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