Cytobacillus firmus: NAF01_12320
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Entry
NAF01_12320 CDS
T08260
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00521
Streptomycin biosynthesis
cfir00523
Polyketide sugar unit biosynthesis
cfir00525
Acarbose and validamycin biosynthesis
cfir00541
Biosynthesis of various nucleotide sugars
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01250
Biosynthesis of nucleotide sugars
Module
cfir_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NAF01_12320 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NAF01_12320 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NAF01_12320 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NAF01_12320 (rfbB)
00525 Acarbose and validamycin biosynthesis
NAF01_12320 (rfbB)
Enzymes [BR:
cfir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NAF01_12320 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
URT73184
LinkDB
All DBs
Position
complement(2421413..2422372)
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AA seq
319 aa
AA seq
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MKKHLLITGGSGFIGSNFISYMLRNSNYYITNLDSLTYAANQVMIQEFEKSNRYHFINCD
IAIEADLGKVFNQRYEAIINFAAESHVDRSISNAAPFIQTNIKGTFYLLQAVLTGKAFKM
IQISTDEVYGSLEPLDPPFKEVSPLAPNNPYSASKASADLLVRSFFKTHQLPLIITRCSN
NYGPMQHSEKLIPKTISLAQKDKRIPLYGDGLNIRDWIYVEDHCKAIHLVLEKGVPGEIY
NIGGTEEKTNLDIVEIILRNLKKDTGLIQFVNDRKGHDRRYAMDTSKIFRDLGWKPSVSF
KEGIKKTIEWYLMRMDGRK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaacacctcctaataactggcggttcaggatttattggttcaaatttcatttcc
tatatgctgcgcaactcaaattattatatcaccaacttggattctttgacttatgccgca
aatcaggtaatgattcaagaattcgaaaaatcgaatcgctatcattttattaattgtgat
attgctatagaagcagatttaggaaaagtatttaaccaacgatatgaagctattattaac
tttgctgcagaatcacacgttgatcggagcatttcgaatgcagctccatttattcaaaca
aatattaaaggtactttttatttattgcaggctgttttaacgggaaaagcctttaaaatg
attcaaatatcaactgacgaagtatatggctctcttgagccgcttgatcccccatttaaa
gaagtaagtcctcttgcaccaaacaatccatactctgcaagtaaagcaagcgctgatttg
ctagtgagatcattttttaaaacacatcagcttcctttgatcattacacgttgcagcaat
aattatggtcctatgcagcattcggaaaagttaattcctaaaacaatttctcttgcacaa
aaagataagcgaatcccgctatacggtgatggattaaatatacgtgattggatatatgta
gaggatcattgtaaagcgattcatttagtccttgaaaaaggggttccaggagaaatttat
aatattggcggtactgaggaaaaaacaaacttggatattgtagaaataatacttaggaat
ttaaaaaaggatacaggactaattcaatttgttaatgatcggaaaggtcatgaccgtcga
tacgcaatggatacatcgaaaatttttagggatttaggatggaaaccaagtgtatccttc
aaagaaggaattaaaaaaacaatagaatggtatttaatgagaatggatggcaggaagtga
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