Cytobacillus firmus: NAF01_12635
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Entry
NAF01_12635 CDS
T08260
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
cfir
Cytobacillus firmus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS
AAA_2
PAS_9
AAA_5
AAA
Mg_chelatase
PAS_8
PAS_7
PAS_4
Diguanyl_cycl_sensor
HTH_17
nSTAND3
DUF5358
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
URT73242
LinkDB
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Position
complement(2486948..2488846)
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AA seq
632 aa
AA seq
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MSEIAILTPIDGLIQVSREAAKKTGEEVTVKKVSFRNAVEAAKEFEKNGTEVIISRGTLG
LKLLESDINLPVVQIPITGYDLLRTIKEAQKLGEKIGIADNEEILQGIETIESVLGLSIE
KHCVSMPEEAEAAVESLCKKQIDVLIGKSIFTNKVKKETIRTVILTSGVESVIQAINEAR
SLINVRRSEIKRTKELQAILDFIADGVIAVDEKGVITVCNPSVYSILNLPYDSVIGKSID
DILVHSRMSKVLSTGKEELNRIQDENGVKVVANRIPIRHEQKVLGAVCTFQEINRIQQQE
QEIRKKLLHRGHVTKYSLHNIVGESDMYKKAIQKVKKYSQVDSTILLTGETGVGKEVFAH
LIHSFSKRSEGPFVAVNCAAIPENLLESELFGYVEGAFTGAKKGGKTGLFELAHQGTIFL
DEIGELAESLQAQLLRVLQEGEVMRLGDERVIPINIRVIAASNRDFEKMVEEGRFRADLY
YRLNILDIPIPSLRERIADIPLLCNFFIEELEPGIRRNIRGFTADAMKILQNYHWPGNIR
QLRNIVERAMILSPDKVIDSDTVLAAGGKDFLGMQELKAHHEKDDEGDETKLYHLEKEYI
LNVLKQVNGNKTEAAKILGIGRTTLWRKINSM
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaattgcaattctgactccaattgacgggctgatacaggtttcaagggaagcc
gcgaaaaaaacaggagaagaagttacagtaaagaaagtgagttttcggaatgcggtcgaa
gcggcaaaggaatttgaaaaaaacggtacagaagtaatcattagcagagggaccttggga
ttaaagctgttagaatctgacatcaatttacctgttgtacagattcccataactggatat
gacttgcttcgaacaatcaaggaagcacagaagctcggagaaaaaattgggattgcagac
aacgaagaaatcttacagggaatcgaaacaattgaatctgtgctgggcttatcgattgaa
aagcactgtgtatcaatgccggaggaagctgaagcagctgtggagtcactctgcaaaaaa
caaatagatgtgctgataggcaaaagcatttttaccaacaaagtaaaaaaagaaacgatt
agaacagtcatattaacgtccggtgtggaatcggtcattcaggcaatcaacgaggcaaga
agcctaatcaatgtgaggcgctcagaaataaaaagaacaaaggaacttcaggcaattctt
gattttattgcagatggtgtgatagcagtggatgaaaaaggggtgatcacagtttgcaat
ccttccgtctacagcatactaaaccttccctatgattcagtaatcggcaagtccatagat
gatattctcgtgcattcgcgaatgagcaaagttctttcgactggcaaggaagagctgaac
cgcatccaggatgaaaatggggtgaaagtagtcgcaaaccgaattcccattcggcacgag
caaaaggtgcttggagcagtctgtacatttcaggagattaatagaattcagcagcaggaa
caggagatccgcaaaaagctgcttcaccggggccatgtaacgaaatatagtttacataat
atcgtcggtgagagtgacatgtacaaaaaagcgattcaaaaggtgaagaagtactcacaa
gtggattcgaccattctccttacaggggaaacgggtgtgggaaaagaggtgtttgcccat
ttgatccacagcttcagcaagcggtcggaagggccatttgttgcagtgaactgtgcagct
atccctgaaaacttactggaaagcgaattattcgggtatgttgaaggagccttcaccggg
gctaaaaagggcgggaaaacgggtttgttcgaattagcacaccaggggaccattttcctg
gatgaaatcggcgaactggctgaatctcttcaggctcagcttctgagggtccttcaggag
ggagaggtgatgcggctcggagatgaaagggtcatccctattaatatacgtgtgatcgct
gcttcaaaccgggatttcgaaaagatggtagaagaaggacgtttccgggccgatttgtac
tatcgccttaatatccttgatattcctatcccgtcattgcgtgaacggattgctgatata
ccgctgttatgcaatttttttatagaagaactggagcctggaatccggagaaatattaga
ggatttactgctgatgcgatgaaaatcctgcaaaactatcattggccaggaaatatccgt
cagctcagaaacattgttgaaagagctatgattctttctcccgataaggtgattgattct
gatactgttttagctgctgggggaaaagactttctaggtatgcaagaactcaaggcacat
catgaaaaagatgatgaaggtgatgaaacaaagctttatcaccttgagaaagaatatatt
ttgaatgtgctcaaacaggtaaacggcaataaaacagaagcggcaaagatacttgggatc
ggcaggacgaccctatggcgaaaaattaatagtatgtga
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