Cytobacillus firmus: NAF01_12895
Help
Entry
NAF01_12895 CDS
T08260
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
cfir
Cytobacillus firmus
Pathway
cfir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NAF01_12895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_12895
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NAF01_12895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_14
HTH_31
TPR_2
TPR_12
TPR_11
TPR_8
Motif
Other DBs
NCBI-ProteinID:
URT68722
LinkDB
All DBs
Position
2542300..2543544
Genome browser
AA seq
414 aa
AA seq
DB search
MKEGLIIKYYRERAGLTQTQLGEGICSVTHISKIERGHTQYSSEITNLICKRLNIDLISE
LEKFNMLETKLHEWLDAMVKQQKEDIELIKEELAQNPYLHFSETKSFHSILLARYHLMQG
EHDKGKSLLDSCQKAWNTLDRFERNLLEHTWSIYFLNLQNCKEAIAHLKNINPKDYNNHE
FYFHLATSSHLMNDKVKAYHYGTLALSHFRETNNFKRILDTETVLLIQMGTYDLCQFEET
VKQYHTLIKSCRTHKEEAREMNLWHNLAVEYFAKGFYSEASEVYKKLLEQWEVNPNPPLK
LSAIRGYVHSCLNLDHYNKQNLRSLLDDGRRLAEQFQNKTYQYVFYMLDILLEDKDINDY
YFFLENTFLPHLYELGNSTLITLYEKELFHYYRKSSQHEKASGLAAKYFEPQVH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaaggtttaattataaaatattaccgggaacgggctggattgacccaaacgcag
ctgggcgaagggatttgttcagtgactcatataagcaaaatagagcgggggcatacacaa
tattcgtctgaaatcacaaatctgatctgtaaacggctgaatatagatcttataagtgag
cttgaaaagtttaatatgctggagactaaacttcatgaatggctggatgccatggttaaa
cagcaaaaagaagatatagaattgattaaagaggaattagcccaaaatccttacctgcat
ttttcggaaacaaaatcttttcactcaatccttttggctcgctaccacctcatgcaagga
gagcacgataaaggcaaatcgctgttagacagctgccaaaaagcttggaacactcttgat
cgttttgaacggaatcttctagaacatacttggagcatttattttcttaacttacagaat
tgcaaagaagccatcgcccacttaaagaatattaatcctaaagattataataaccatgaa
ttttattttcacctcgcaacctcttcccatttgatgaatgacaaagtaaaagcctatcac
tatggtactcttgcactatcccattttcgggaaaccaataattttaaaagaattcttgat
acagaaaccgttttactgatacaaatgggtacatacgacctttgccaatttgaagaaacc
gtaaagcagtatcatacattaatcaaatcctgccggactcataaagaagaagccagggaa
atgaacctttggcataatcttgccgttgaatactttgcaaaaggcttttattcagaagca
agcgaagtatacaaaaagctattggaacaatgggaggttaatccaaacccgcctttaaaa
ttaagtgctataagaggttatgttcatagctgccttaatttggatcattataataaacaa
aatctcagatccttgctggacgatggccgcaggctagctgaacaatttcaaaataaaacc
tatcaatatgttttttatatgctcgatatccttttagaagataaagacataaatgattac
tatttctttttagaaaacacattccttccccacctttatgaattagggaatagcacatta
atcactctctatgaaaaagaactgtttcattattacaggaagtcgtcacagcatgaaaaa
gcaagcggacttgcagccaaatacttcgaaccccaagttcattaa
DBGET
integrated database retrieval system
