Cytobacillus firmus: NAF01_12900
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Entry
NAF01_12900 CDS
T08260
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
cfir
Cytobacillus firmus
Pathway
cfir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NAF01_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfir03000
]
NAF01_12900
Transcription factors [BR:
cfir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NAF01_12900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_1
TPR_2
HTH_31
RapH_N
TPR_10
TPR_8
TPR_12
TPR_INTS8_3
COMMD9_HN
TsaE
Motif
Other DBs
NCBI-ProteinID:
URT68723
LinkDB
All DBs
Position
2543790..2545049
Genome browser
AA seq
419 aa
AA seq
DB search
MLEGEIIRYYREKSGLTQAMLGEGICTPTHVSKIERGKTAYSPEIISLFSAVLNIDIQKE
IEYFRDLDKRLQEWHKAIIMYRVARAEEIKNELESSPFIQSSKYAAHYLLLKARYHLLHQ
ELEETSRIIKKISNEFPNLSPFERNLFFHVQGMYYINQAIKPDNPDQQKALQVLKNIDID
EYGNEEYFYHLAIAYHYIDSKIMAYMLAEKSLQHFKNTNNYTMAIKAESIILLQISSDIL
TDMDKLAERYNQLIWDCERIGFHDFKGLLYNNLGFEYFNREQYAEAKDCYKQALRLADRN
TIIYLQRLYSYLNSCIEGKLSGKTALLKKACKGIQVSKELKSTLYLSLFKLSKYQLYHQR
EKYFKYLEEKAFPEFIKIKHMILMRRYGKKLYEYYIETGNHEKAIHLNRQLEGKELINV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaggggaaattattagatactaccgggaaaaatcagggctcacacaagccatg
ttaggtgaaggaatttgtactcctacccatgtaagcaaaattgaaagagggaaaactgcg
tattcaccggaaattatttcacttttctctgccgttttaaatattgacattcaaaaggaa
attgaatacttccgggatctggacaagcgcctgcaggaatggcataaagccatcatcatg
tatagagtagccagggcggaggaaatcaaaaatgaattggaaagctcgccttttattcaa
tcttctaaatatgcagcccactatcttcttttaaaggcaagatatcatttactgcatcag
gaattagaggaaacatcccggatcattaagaaaataagcaatgagtttccaaacctctcc
ccttttgagagaaatttatttttccatgttcaagggatgtattatattaaccaagcaata
aaacctgataatccggatcagcaaaaagcgcttcaggtattaaaaaacatcgatattgat
gaatatggcaatgaagaatacttttatcacctggcaattgcctatcattatatcgattca
aaaatcatggcttacatgttagcggaaaaatcattgcagcatttcaaaaacacgaacaac
tacacgatggcgataaaagcggaatccattatcctcctgcagatcagcagtgatatcttg
accgacatggataaactggcagaacgatataatcaactaatttgggactgtgaacgaatt
ggttttcatgattttaaaggcctgttatacaataatttaggatttgagtatttcaatagg
gaacaatatgcggaggcaaaggattgctacaaacaggccctgcgtttagctgacaggaat
acaatcatttatcttcagcgattatattcttaccttaattcctgtatagaaggcaaatta
tccggtaaaacagcccttcttaaaaaagcttgtaaaggaattcaggtgtcaaaggagctt
aaaagcactttatacttatcattatttaaactttctaagtatcagctttaccaccagcgt
gagaaatattttaagtatttggaagaaaaggcctttcctgaatttattaaaattaagcat
atgattctcatgcgcaggtatggcaaaaagctttatgaatattacatcgagacaggaaat
catgaaaaagccattcatctgaacaggcagcttgaaggcaaagaattaattaatgtgtag
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