KEGG   Cytobacillus firmus: NAF01_15905
Entry
NAF01_15905       CDS       T08260                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
cfir  Cytobacillus firmus
Pathway
cfir00061  Fatty acid biosynthesis
cfir00071  Fatty acid degradation
cfir01100  Metabolic pathways
cfir01212  Fatty acid metabolism
cfir02024  Quorum sensing
cfir04146  Peroxisome
Module
cfir_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:cfir00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    NAF01_15905
   00071 Fatty acid degradation
    NAF01_15905
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    NAF01_15905
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NAF01_15905
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:cfir01004]
    NAF01_15905
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfir04147]
    NAF01_15905
Enzymes [BR:cfir01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     NAF01_15905
Lipid biosynthesis proteins [BR:cfir01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   NAF01_15905
Exosome [BR:cfir04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   NAF01_15905
  Exosomal proteins of breast cancer cells
   NAF01_15905
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: URT69285
LinkDB
Position
complement(3147976..3149883)
AA seq 635 aa
MSKTFPQLLIERAYRNGSQVALREKEFGIWNEITYEAFLDNVKNFSLGLASLGLKREDKL
AIIGDNRPEWVISELAAQSLGGISVGIYQESLSAELSYIIDNCDATIIVAEDQEQVDKLL
EIKESIPKVRTIIYYDSRGMRGYREDFLLEFNEVLEMGRSFHSGQPGLFSEEVDKGSADD
VAILSYTSGTTGNPKGTMLTYRNLIDMAKNLSDIDPLTDKDEYVSFLPLAWIGEQMMTLA
MGLYNGMTINFPEEPATVLEDLREIGPQVMFSPPRIYEDMVSRFQVRIQDSGWLKRKIYN
WCKPIGEKVAKAHFENKPVSTGTKVLYKMADYLMFSAIRDHFGLLKIKRAYTGGAPLGPD
VFEFFHSIGVNVKSIYGQTEVAGISIVHRDGDIKLDSVGIPIPGTEVKISEEGEILIKSS
SVCKGYYKNEKSTTETIQDGWLHTGDAGRLDEGGHLYIIDRIKDVIRLDTGEMFSPQFIE
NKLKFSSFIQEAVAIGKDRPYVVAMINIDMKNVGRWAEKNQISYTTYTDLSSKPQVLELI
EKQVQEINQTLPEKARVKKFVLLYKELDADDEELTRTKKVRRQFVAKKYQALIDGLYTED
KKIRVNGTIKYRDGMEQTIQTTLQVIFMDEGEGAA
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgagcaagacgtttccgcagctgctgattgaaagggcttacaggaatgggtcacaagtt
gctttaagagaaaaggaatttggaatttggaatgaaatcacttatgaagcgttcttggac
aatgtaaagaacttcagcttgggtttagcatcgctgggtctgaaaagagaagataagctt
gctattattggcgataacaggcccgaatgggtaatcagtgagcttgctgcgcaaagctta
ggcggcatttcagtaggaatttatcaggaatccctgtctgctgaactaagttatattatc
gataattgtgacgcaaccataatcgttgcggaggaccaggagcaagtcgataaactgctg
gaaattaaagaatccattccgaaagtcagaacaattatttattatgattcacgcggcatg
aggggttaccgggaggactttctgctggaatttaacgaagttcttgaaatgggacgaagt
tttcactcagggcagcctggcttattctcagaggaagttgataaggggtctgcagatgac
gtggcgattttatcctatacttcaggaacaacaggcaatccaaaaggaacgatgcttact
taccgaaatctgatcgatatggctaaaaatctgtcagacattgatccgctgacagataag
gatgaatatgtttcattccttccgcttgcctggatcggggaacagatgatgacccttgcc
atgggcttatataatgggatgacgataaatttccctgaagagccggcaaccgtattggaa
gacctgcgtgaaattggaccacaggttatgttttcgccacccagaatctatgaagatatg
gtatcgcgttttcaggtcagaattcaggacagcggctggctgaaacgaaagatttataac
tggtgcaagccaatcggcgagaaggtagcaaaggcccattttgaaaataaaccagtcagt
acgggtacgaaggttctttataaaatggccgattacctgatgttcagtgccatccgcgat
cactttggactcttgaagatcaagcgtgcctatacaggcggtgcacctttaggacctgat
gtatttgaattttttcatagcataggagttaatgtgaaaagcatttacgggcagacagag
gtagccggcatatccattgtgcacagggacggcgatattaagcttgatagtgttggaatt
ccaataccgggtacagaagtgaaaatttctgaagaaggggaaattctcatcaaaagctcc
agtgtctgcaaggggtattacaaaaatgagaaaagcacaacggaaaccattcaggatggg
tggcttcataccggggatgcagggaggctggatgagggaggacatttgtatatcattgac
cggattaaggatgttattcgccttgatacaggggaaatgttctctccgcaatttattgaa
aacaagctgaagttcagttcgttcatacaggaagcggtagctatcgggaaggaccgtcca
tatgtggttgccatgattaatatcgatatgaaaaatgtagggcgctgggcagagaaaaat
caaattagctataccacttataccgatttatcttccaagccgcaagtgctggagctgatt
gaaaaacaggtgcaggaaatcaatcagactctgcctgaaaaggcccgggtgaaaaaattt
gttctgctttataaagaactggatgcagatgatgaagagcttacaagaactaagaaggtc
cgcaggcagtttgttgctaaaaaatatcaggccttaattgatggactttatacagaagac
aaaaaaatacgtgtcaatggcaccatcaagtatcgtgatggcatggaacaaaccatccag
acaacgcttcaggtgatttttatggatgaaggagagggggcagcttaa

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