Cytobacillus firmus: NAF01_16050
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Entry
NAF01_16050 CDS
T08260
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00630
Glyoxylate and dicarboxylate metabolism
cfir00680
Methane metabolism
cfir01100
Metabolic pathways
cfir01120
Microbial metabolism in diverse environments
cfir01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NAF01_16050 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
NAF01_16050 (fdhF)
Enzymes [BR:
cfir01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NAF01_16050 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4
Fer4_7
NADH-G_4Fe-4S_3
Fer4_21
Fer4_10
Fer4_6
Fer4_8
Fer4_2
Fer2
Fer4_9
Fer4_15
Fer2_3
Fer4_17
PMT_C3
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
URT69313
LinkDB
All DBs
Position
complement(3180805..3183771)
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AA seq
988 aa
AA seq
DB search
MIDLPPSLNIKINGIEMKAEQDQTVLQLLNDSSIEIPQVCFHPSLGAIETCDTCIVSVNG
ELVRSCSTKIKDGDIIDTVEPDVKQAQTIAMDKILFNHELYCTVCDYNNGGCEVHNTVKA
MKINHQSIPFDHKPYEKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERQRPR
VIWDNDVPINESSCVSCGHCSTVCPCNAMMEKGMEGEAGFLTGIAKNTLRPMIEITKNVE
TGYGSILAISDMEAAMREEKIKKTKTVCTYCGVGCSFDVWTKGREILKVEPQAEAPANGI
STCVKGKFGWDFVNSEERLTKPLIREGDSFREAEWDEALNLIARKFTEIKEKHGPDALSF
ITSSKCTNEESYLMQKLGRAVVGTNNIDNCSRYCQTPATVGLFRTVGYGGDAGSIEDIKN
AELVLIIGSNTSESHPVLSTRVKRSQKLNGQKVIVADLREHEMAERSDLFVRPRAGTDMV
WLSAITKYIIDQGWADEKFLQEKVNGLEEFVSNLEKYTLEFAEETTGISRDNLIKMAEMI
HEAESVSALWAMGVTQHLGGSDTSTAISNLLLVTGNYAKSGAGAYPLRGHNNVQGAGDFG
SSPDNLPGYQKVSDPDVRRKFENAWGVKLPEKAGMNNHEMVEGVHEGQLKAMYLKGEDMG
LVDSNINYVQAAFEKLDFFVVQDIFLSRTAEFADVVLPASPSLEKEGTFTNTERRIQRLY
KAFEPLGDSKPDWQIITEVANRLGADWTYTHPSEVMAEAAKLMPLYAGVTYDRLEGYNSL
QWPVAEDGTDTPLLYTDGFPFPDGKARLFPVDWTPALEFPAEYDIHVNNGRLLEHFHEGN
MTYKSKGISSKTPEVFLEVSPELAKERGLKDGTLVRLTSPYGNVKVKCHITDRVKGKEVY
LPMNDRGDAAINLLTSSYADKDTDTPAYKETKVKLEILREEGSNPLPRINHRYGNPQPQI
GVNVQKKWARKDYIFPGELVKKERKQHG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttgccgccatcactaaatataaagataaatgggatagaaatgaaggcagaa
caggatcaaaccgttttgcagttattaaatgacagctcgatcgaaattcctcaggtctgc
ttccatcccagcctgggagcaatagaaacctgtgatacctgcattgtttccgtgaatgga
gaacttgtgcggtcatgctccacgaaaattaaagatggagacataatcgatacggtggaa
cctgatgtaaaacaggcacagactattgccatggataaaattctctttaatcatgagctg
tattgtacggtttgtgactataacaacgggggatgtgaagtacataatacggttaaggcg
atgaaaatcaatcatcaaagcatcccgtttgatcataagccatatgaaaaggatgaatct
cacccattttacagatatgatccggatcagtgcattctttgcggcagatgtgtggaagcc
tgtcaggatgtccaggttactgaaaccctaacaattgattgggagagacagagaccaaga
gttatatgggataatgatgtgcccattaacgagtcctcctgtgtttcctgtggacactgc
tccactgtttgtccgtgtaatgccatgatggaaaaggggatggaaggcgaagcagggttt
ctgactggcatagccaaaaacacccttcgtccaatgatcgaaatcactaaaaatgttgaa
acaggatatggctccattctggcgatatccgatatggaagctgctatgcgggaagagaaa
attaaaaagaccaaaaccgtctgcacatattgcggggtcggctgcagctttgacgtatgg
acaaaaggccgcgaaatattgaaggttgaacctcaggcagaagcgcccgccaatggcatt
tctacatgtgtaaaagggaaatttggctgggactttgtaaatagtgaggaacgtttaacc
aaaccgctaatcagggaaggcgattcatttcgtgaagcagaatgggacgaagctctaaat
ctgattgcccggaaatttacagaaatcaaagaaaagcatggcccggatgcgctaagcttt
attacttcttctaaatgcaccaatgaagaatcgtatctcatgcagaagcttggcagggca
gttgtaggaacgaacaatattgataactgttcaaggtattgccagactccggcaacggta
ggcttattccgaactgttggatatggcggtgatgcaggttctatagaagatattaaaaac
gccgaattagtgctgataatcggctctaatacatcggaatcccacccggttctttccacc
agggtgaaacgatcccagaagcttaacggccagaaagtaatcgtggctgacttgagggaa
cacgaaatggcagagcgttcggatctgtttgtgcgtcctagagccggtactgatatggta
tggctttctgccattacgaaatacattatcgatcagggctgggcggatgagaagtttctt
caggaaaaagtgaacggactggaggaatttgtatcaaatctggagaaatatacgctggaa
tttgcagaagaaacaaccggtatctccagagacaatctaatcaaaatggctgaaatgatt
catgaagccgaaagtgtttctgcattatgggcaatgggtgtcacgcagcatctaggaggc
agtgatacaagcacagccatttcaaatctcctgctagtaaccggcaattacgctaagtct
ggtgcaggtgcatatccattaaggggccataataatgtacagggggcaggagatttcgga
agcagtcctgataatttgcctggttaccaaaaggtgtcagatcctgatgtgagaaggaag
ttcgaaaatgcctggggtgtaaagcttcctgaaaaagccggaatgaataatcacgagatg
gtagagggagttcatgaggggcagctgaaagcgatgtacctgaagggcgaagatatgggg
cttgtggattccaacatcaattatgtgcaggcagcatttgagaagcttgatttctttgtc
gtccaggatatttttctatcccgtacagctgagtttgcagatgttgttctcccggcaagc
ccaagtctggaaaaggaagggacatttacgaacacagaaagaagaatccagcgtctgtac
aaggcgtttgagccccttggagattcaaagccggattggcagattattactgaagttgcg
aatcgcttaggagcagactggacgtatacacatcctagcgaagtaatggccgaagcagca
aagcttatgcctctatacgctggcgttacctatgatagattggaaggatacaatagtctg
caatggcctgtcgctgaggacggaactgacactccactcctctatacggatggcttcccg
ttcccggatggcaaggcaagactttttccggtagattggactcctgctcttgaattcccg
gcggaatatgatatccatgtcaataatggccgtctcctggagcatttccatgaagggaat
atgacatataagtcaaaaggaatcagctctaaaacaccggaagtgttccttgaggtatca
ccggagctggcaaaggagcgaggcttgaaagacggcacgcttgttcgactgacttcaccg
tatggcaatgttaaagttaaatgccatataaccgacagggtaaaaggaaaggaagtttac
cttcctatgaatgatagaggagacgcggccataaatttattaacaagcagctatgccgac
aaggatactgatacaccggcatataaggaaacaaaggtaaagcttgaaattctgagagaa
gaaggcagcaatccacttcctagaattaatcaccgctatggcaatccgcagccgcaaata
ggtgtaaatgtccaaaagaaatgggcaaggaaagattatattttcccgggagaattggtg
aaaaaggagcggaagcagcatggctaa
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