Cytobacillus firmus: NAF01_16520
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Entry
NAF01_16520 CDS
T08260
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cfir
Cytobacillus firmus
Pathway
cfir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NAF01_16520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_16520
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NAF01_16520
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Prok-RING_4
DUF7837
zf-Vps39_C
CDC24_OB3
TssR_VWA
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
URT69401
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All DBs
Position
complement(3275059..3275913)
Genome browser
AA seq
284 aa
AA seq
DB search
MHTMWKGSISFGLVNIPIKLHSATEDKDIKLRNLHKECHSPIKYEKTCPVCEKEIKNEDI
VKAYEYTKGKFVVLEDEDLEKLKQENEDKAVEIMDFVKIQEIDPIYYNRTYYMSPGDGGG
KAYSLLRKALETSEKVGLAKIIIRSKEQLAVVRVYENTLVMETIHYPDEVRKAADVPNVP
AEDKVTDKEIDTAIMLIDQLTTEFKPEKYNDDYRTALLELIEAKRTGKDIVTPVEKEPAA
NVTDLMAALQASIDKTKPADAETKKKPAAKKKRASTKTKAKKQA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaaaggaagcatcagttttgggctggttaatataccaattaagctg
cattcggctacagaagataaggatatcaagctgagaaatcttcataaggaatgtcattcg
ccaattaagtatgagaaaacatgtcctgtttgtgaaaaggaaattaagaacgaggatatt
gtaaaagcttatgaatacacaaaaggaaagtttgttgttttagaggatgaggatttagaa
aagcttaaacaggaaaatgaggataaagctgtagaaattatggactttgtaaaaatacag
gaaattgatccaatttactacaatcgcacctattatatgtctccaggggacgggggaggg
aaagcttactcccttttaagaaaagcgctcgagacgtctgaaaaagtaggtttggcaaaa
atcattatccgctccaaagaacagctggctgttgtccgtgtatatgaaaatactcttgtc
atggagacgatccattatcctgatgaagtacgcaaggctgcggatgtgccaaatgtgcct
gcagaagacaaagtgacagataaggagatcgatactgccatcatgctgattgatcaatta
accacagaatttaaacctgaaaaatataatgatgactaccggacagctcttttggagctt
atagaagcaaaacggactggcaaagatatcgtcacacctgttgaaaaagagcctgcggca
aatgttaccgacctcatggctgcccttcaggcatcaattgataaaactaaacctgctgat
gcggaaacaaagaaaaaacctgcagctaaaaagaaacgtgcttcaacaaaaacaaaggct
aaaaagcaagcttga
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