Cytobacillus firmus: NAF01_16530
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Entry
NAF01_16530 CDS
T08260
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00300
Lysine biosynthesis
cfir00470
D-Amino acid metabolism
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01120
Microbial metabolism in diverse environments
cfir01230
Biosynthesis of amino acids
Module
cfir_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
cfir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NAF01_16530 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NAF01_16530 (dapF)
Enzymes [BR:
cfir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NAF01_16530 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
URT69403
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All DBs
Position
complement(3277913..3278896)
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AA seq
327 aa
AA seq
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MNIELLKCHGSGNDFFIIDEMSNTYHFTEENRAELARAICDRSTELGSDGILFVLKSDKA
DARMRVFNPDGSEASMCGNGLRCVARYVCELLGLKEAIIETMKADLQVKKQEDIFEDIPT
YLVEISPVSFDLKDLPLVLDKDTVINEKVSGISDELAFTALSVPNPHFVSIVEKEQIASD
LQKEISEYLNGPNEFFPDGVNVSFVKPLKKGRIYVRTFERGVGFTNACGTAMSASTLVTC
MNGLNKIEEPVEVYNNGGKVRCVVHEENGRQSIDLIGNASYVYRCEAETDMDNPAEFSLS
PKEEYTGEIKQYAKLQEFAQAVLKEWL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattgaactattgaaatgtcatggatcaggaaatgatttctttattatagatgag
atgtccaatacgtatcattttacagaagagaatcgtgcggagctagccagagctatatgc
gaccgcagcaccgagctgggctcagatggaattcttttcgtactaaaaagtgataaagca
gatgcccggatgcgtgtttttaatccggatggatctgaagcctcaatgtgcggaaatggg
ttaagatgcgtcgcccgttatgtttgtgaacttcttgggctgaaagaagctatcattgag
accatgaaagctgatttgcaggtgaaaaagcaagaagatatatttgaggacattccgact
tatcttgttgaaatctcacctgtttcattcgatttgaaggatcttcctttagttcttgat
aaagatactgtaattaatgaaaaagtgagcgggatttcagatgaattagcttttacagcc
ttatcagtccctaatcctcattttgtttccattgtggagaaagagcaaatagcatcagac
ctgcaaaaagagatcagcgaatatttgaatggaccgaatgaattctttcctgatggagta
aatgtcagctttgtaaagccgctaaaaaaagggcggatttatgtacgaacatttgaacgg
ggagtaggatttaccaatgcctgcggtactgccatgtccgcttcgacacttgtcacttgc
atgaatgggcttaataaaatcgaagagcctgtagaggtatataataatggcggaaaggtg
cgctgtgtagtccatgaagagaatggcaggcaatccattgacttaattggaaatgcgagc
tatgtttaccgctgtgaagcagagactgacatggataaccctgcagagttttccctttcc
ccgaaagaggaatatactggagaaattaagcagtatgctaaacttcaggaatttgctcag
gcagtacttaaagagtggttgtag
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