Cytobacillus firmus: NAF01_17890
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Entry
NAF01_17890 CDS
T08260
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00300
Lysine biosynthesis
cfir00470
D-Amino acid metabolism
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01120
Microbial metabolism in diverse environments
cfir01230
Biosynthesis of amino acids
Module
cfir_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
cfir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NAF01_17890 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NAF01_17890 (lysA)
Enzymes [BR:
cfir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NAF01_17890 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
URT69658
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All DBs
Position
complement(3532448..3533767)
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AA seq
439 aa
AA seq
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MFFHGTMKANDKGHLEIGGMDTVELAGQFGTPLYVYDVALIRDRARGFKETFEKLGIEAQ
VAYASKAFSTVAMVQLVDEEGLSLDVVSGGELYTALAADFPSERIHFHGNNKSREELEMA
LKNHVGCIVVDNFYELELLEEICESLAVKTKILLRVTPGIEAHTHDYILTGQEDSKFGFD
LQNGQAEKALLIALNSSWIETLGLHCHIGSQIFDTTGFILAAKKIFEKMAEWKEKHAYEP
KVLNLGGGFGIRYTEEDDPIHASKYVEEIILEVKKQAKHFSMKMPEIWIEPGRSLVGDAG
TTLYQTGSRKEVPNVRNYLAVDGGMSDNIRPALYQAKYEAVLANRVLDKPEETVSIAGKC
CESGDMLIWDLPLPKAGDQDLLAVFCTGAYGYSMANNYNRIPRPPVVFIENGEAKLVVKR
ETYEDLLRLDLPINEKIKN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcacggcaccatgaaggcaaatgacaaagggcatcttgaaattggcggtatg
gatacagtcgaactcgccggtcaatttggaacacctttatacgtatatgatgtggcatta
ataagagatagagcaaggggatttaaggaaactttcgaaaagcttggaatagaagcacaa
gttgcatatgcgagcaaagctttctcaacagtagcaatggttcagcttgtagatgaagaa
ggactatcattggatgtggtatcaggcggagagttatacactgctcttgctgcagatttt
ccatctgaaagaatccattttcacgggaacaataagagcagagaagaacttgagatggct
ctaaagaatcatgtcggctgtattgttgtcgataatttttatgagctggaattattagag
gaaatctgtgaatctcttgcggttaaaactaaaattttactgagggtcacgccaggaatc
gaggcacatacccatgactatatcttaaccggtcaggaagattcaaagtttgggtttgac
ctgcagaatggtcaggctgaaaaggctctgctaatagctctaaattcaagctggattgaa
acgcttggactgcactgtcatatcggctctcagattttcgatacaacaggcttcattttg
gctgccaagaaaatttttgagaagatggcagaatggaaagaaaaacatgcatatgaacct
aaagtgcttaacttaggcggaggttttggaatccgctatacagaagaagatgatccgatt
catgcatctaaatatgttgaagaaattatcctggaagtaaaaaaacaggctaagcatttt
tccatgaagatgccggaaatttggattgagccggggcgttccctagtgggagatgccgga
acaactttataccagactgggtcacgcaaagaggttccaaatgtaagaaattatctcgct
gtagatggcggcatgagtgataatatcaggccggccctttatcaggctaagtatgaagcg
gtattggcaaaccgggtgttggataagccggaagagacagtatcaattgccggaaaatgc
tgtgaatcaggcgatatgcttatttgggatttgcctcttccaaaagcaggtgatcaggac
ctcctggctgttttctgtacaggcgcatacggttattccatggcaaacaattataatcga
atcccaaggcctcctgtagtttttattgaaaatggagaggctaagcttgttgttaaaagg
gaaacatacgaggatctattaagattggatctgcccattaatgaaaaaataaaaaattaa
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