KEGG   Cytobacillus firmus: NAF01_18200
Entry
NAF01_18200       CDS       T08260                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cfir  Cytobacillus firmus
Pathway
cfir00010  Glycolysis / Gluconeogenesis
cfir00020  Citrate cycle (TCA cycle)
cfir00260  Glycine, serine and threonine metabolism
cfir00280  Valine, leucine and isoleucine degradation
cfir00310  Lysine degradation
cfir00380  Tryptophan metabolism
cfir00620  Pyruvate metabolism
cfir00630  Glyoxylate and dicarboxylate metabolism
cfir00640  Propanoate metabolism
cfir00670  One carbon pool by folate
cfir00785  Lipoic acid metabolism
cfir01100  Metabolic pathways
cfir01110  Biosynthesis of secondary metabolites
cfir01120  Microbial metabolism in diverse environments
cfir01200  Carbon metabolism
cfir01210  2-Oxocarboxylic acid metabolism
cfir01240  Biosynthesis of cofactors
Module
cfir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cfir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cfir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cfir_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cfir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NAF01_18200 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NAF01_18200 (lpdA)
   00620 Pyruvate metabolism
    NAF01_18200 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NAF01_18200 (lpdA)
   00640 Propanoate metabolism
    NAF01_18200 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NAF01_18200 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NAF01_18200 (lpdA)
   00310 Lysine degradation
    NAF01_18200 (lpdA)
   00380 Tryptophan metabolism
    NAF01_18200 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NAF01_18200 (lpdA)
   00670 One carbon pool by folate
    NAF01_18200 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfir04147]
    NAF01_18200 (lpdA)
Enzymes [BR:cfir01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NAF01_18200 (lpdA)
Exosome [BR:cfir04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NAF01_18200 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored NAD_binding_8 AlaDh_PNT_C DAO FAD_binding_2 HI0933_like 3HCDH_N Lys_Orn_oxgnase FAD_binding_3 Thi4 NAD_binding_7 Trp_halogenase 2-Hacid_dh_C CBM_4_9 TrkA_N 2OG-FeII_Oxy_6
Other DBs
NCBI-ProteinID: URT69718
LinkDB
Position
complement(3592164..3593585)
AA seq 473 aa
MAQEYDLVILGGGTGGYVAAIRASQLGLKTAIVEKGKLGGTCLHKGCIPSKALLRSAEVF
ATAKHSEDFGVITSDVSINFGKVQERKNKIVDQLHKGVQHLMKQGKIDVFEGTGRILGPS
IFSPMPGTISVEMNNGDENKMLIPKNVIVATGSRPRTLPGLDIDGQLVMTSDEALALEEV
PNSIIIVGGGVIGIEWASMLSDFGADVTVIEYADRIIPTEDKEISKEMQRLMKKKGVKIV
TGAKVLPETLQKGEGVTISAEVKGSQKEFSAEKLLVSVGRQANTEGIGIENTDIQIEKGF
ISANEYFQTKESHIYAIGDVIGGLQLAHVASHEGIVAVEHIAGQNPSPIDYSLVSKCIYS
SPEAASVGLTEDEAKEKGHNVKTGKFSFRAIGKALVFGESDGFVKIVADKDSDDILGVHM
IGPHVTDMISEAGLARVLDATPWEVAHTIHPHPTLSEAIGEAALAVDGKAIHG
NT seq 1422 nt   +upstreamnt  +downstreamnt
ttggcacaggaatatgatttggtgattttaggcggaggcacaggcggttatgtagcagcc
atccgtgcttcacagcttggtttaaaaacggcaatcgttgaaaaaggaaaacttggaggg
acttgccttcataaaggctgcataccaagcaaggcattattaagaagtgctgaagtgttt
gcaactgcaaagcacagtgaagattttggcgtaatcacaagtgatgtatcaatcaatttt
ggtaaggtgcaggaacgaaaaaacaaaatcgttgatcagcttcataaaggtgttcagcac
ttgatgaagcaaggtaagattgatgtttttgaaggcacaggccgcattcttggaccttct
attttctctccaatgccagggacaatttctgttgaaatgaacaatggggacgaaaataaa
atgctgatccctaaaaatgtgattgtagcaactggatctcgcccccgtaccctgccagga
ttggacattgatggacaacttgtcatgacttctgatgaggcattagctttggaagaagtg
ccaaactccattatcattgttggcggcggagtcatcggcatcgaatgggcatccatgtta
tcagactttggggctgatgtaacagtgattgaatatgctgaccgcattatacctacagaa
gacaaagaaatttcaaaggaaatgcagcgccttatgaagaaaaaaggagtcaaaattgtt
actggagcaaaggttcttcctgaaacccttcagaaaggtgaaggagtaacgatttcagct
gaagtgaaaggttcccaaaaggaattttccgctgagaaattgcttgtttctgtgggccgt
caggcaaatacagaaggaatcggcattgaaaatacggatattcaaattgaaaagggattt
atttccgcaaatgaatacttccagacaaaggaatctcatatctatgcgattggcgatgtc
attggcggtcttcagctggcacatgttgcttctcatgagggaattgttgcagtggagcac
attgcaggccagaatccttctccaattgactacagcctggtttctaaatgcatttacagt
tcaccggaagcggcaagtgtaggattaacagaggatgaagcaaaggaaaaaggccataat
gtaaaaactggcaaattctcattccgtgcaatcggaaaggcgcttgtattcggtgaatct
gacgggtttgtaaaaattgtggcagataaagattccgatgatattcttggtgtccatatg
atcggcccgcatgtaacagatatgatttcagaagcaggccttgcacgcgttcttgatgca
actccatgggaagtagcacatactatccacccgcatccgacgttatctgaagcaatcggt
gaagctgcccttgctgtagatggaaaagcaatccacggataa

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