Cytobacillus firmus: NAF01_18705
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Entry
NAF01_18705 CDS
T08260
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
cfir
Cytobacillus firmus
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfir03019
]
NAF01_18705
03009 Ribosome biogenesis [BR:
cfir03009
]
NAF01_18705
Enzymes [BR:
cfir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAF01_18705
Messenger RNA biogenesis [BR:
cfir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NAF01_18705
Ribosome biogenesis [BR:
cfir03009
]
Prokaryotic type
rRNA helicases
NAF01_18705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
URT69814
LinkDB
All DBs
Position
complement(3684455..3685765)
Genome browser
AA seq
436 aa
AA seq
DB search
MNETKFDRFNLKPFIIEAVKDFGFFEPTEIQERMIPAVLKGESAIGQSQTGTGKTHSYVL
PILHKVDPSRQEVQAIITAPTRELANQIYHEILKVTEHCPEGEEITARCYIGGTDKQRTI
EKLKKQPHVVVGTPGRINDLVKEQALFVHTAEILIVDEADLMLDMGFIEDVDQIAARMPE
KLQMLVFSATIPEKLKPFLKKYMENPKYVHVEPKQAAAANIEHWLLPSKHRNKVELVYQA
LTSLNPYLAIVFTNTKKKADEVADGLISKGLKVGRIHGDLNPRERKKMMKQILDLEFQYI
VATDLAARGIDIQGISHVINYELPTDLDFYIHRVGRTARAGFSGIAVTVYEISDEDALNR
LEKMGIEFRHKDLQKGEWTDLENRNKRKTRQKQTDDIDKKAASLVKKPKKVKPGYKKKMK
WEMDKIKKRERRIKRK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacgaaatttgaccgatttaatttaaagccatttattatagaagcggttaaa
gattttggcttttttgagccgacagaaattcaggaaagaatgatccctgccgtgctgaag
ggtgaaagcgcaataggacaatcacagacaggaacaggaaaaacgcactcatatgtgctg
cctatccttcataaggttgatccttcccgtcaggaggttcaggctattataacagctcca
accagagagcttgccaatcagatatatcatgaaattcttaaggttacagagcattgcccg
gagggagaagaaataactgcacgctgctatattggcggtacggacaagcagagaaccatt
gaaaagcttaaaaaacagcctcatgtggttgtaggcacaccgggaaggatcaatgatctt
gtaaaagaacaggcattatttgtgcatactgccgaaatccttattgtggatgaagcagat
ttaatgctcgatatggggttcattgaagatgttgatcagattgcagcaaggatgccggag
aagctccagatgctggtgttctcagctaccattccagagaagctgaagcctttcctgaaa
aaatacatggaaaatcctaaatatgttcacgtggagcctaagcaggccgcagcagccaat
attgagcactggcttcttccatccaaacaccgtaataaagtggagctggtctatcaggca
ctgacttccttaaatccttacttagccattgttttcaccaacaccaagaaaaaagcagat
gaagtggcagacggattaatcagcaaaggcctgaaagtcggacgtatccacggggacctt
aacccgcgtgaaagaaagaaaatgatgaagcagattctcgaccttgagtttcaatatatt
gtggctacagacctggctgcccggggcattgatatacagggaatcagccatgtaatcaac
tatgagcttccaactgatcttgatttttatatacatcgggttgggcgtacagcgcgtgca
ggtttctcaggaattgctgtaacagtgtatgagatttccgatgaggatgcattaaacaga
cttgaaaaaatgggaatcgaattcaggcacaaagatctgcaaaaaggtgaatggacagac
ctggaaaatcgcaacaagcggaaaacaagacagaaacaaacagatgacattgataaaaaa
gccgcttcattggtgaaaaagccgaaaaaagttaaaccaggctacaaaaagaaaatgaaa
tgggaaatggacaaaataaaaaaacgcgaaagaagaatcaagcgtaaataa
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