Cytobacillus firmus: NAF01_18930
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Entry
NAF01_18930 CDS
T08260
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir03030
DNA replication
cfir03430
Mismatch repair
cfir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAF01_18930 (holA)
03430 Mismatch repair
NAF01_18930 (holA)
03440 Homologous recombination
NAF01_18930 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfir03032
]
NAF01_18930 (holA)
03400 DNA repair and recombination proteins [BR:
cfir03400
]
NAF01_18930 (holA)
Enzymes [BR:
cfir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NAF01_18930 (holA)
DNA replication proteins [BR:
cfir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NAF01_18930 (holA)
DNA repair and recombination proteins [BR:
cfir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NAF01_18930 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
AAA-ATPase_like
Motif
Other DBs
NCBI-ProteinID:
URT69858
LinkDB
All DBs
Position
complement(3731666..3732697)
Genome browser
AA seq
343 aa
AA seq
DB search
MVFDIWNRIKAKSFAPIYLLYGTEPYLINETKQLLISNVLSEEEADFNLSSYDLEETPID
TALEDAETFPFMGERRLIFLHNPVFLTSEKSKAKQEHNLAKLEAYIKEPAPYSVVVFSSS
AEKLDDRKKITKQLKKTAAVLEAKKLNEGELKAWIRERAALNGVQIDESAVELILTLAGA
NLFILTNEIDKLALYANDTKRIDEQMAEKMVSRSLEQNIFSLVDKVVHRKIEEALRIYYD
LLKQNEEPIKILSVITGQFRLIYQVKELARRGYGQQQIAGYLKIHPFRVKLAAGQAQLFA
DEELAAIISLLADADYQMKTGGMNKTMLIEMFLFRLQSQALRK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttggtttttgatatttggaacagaattaaagcgaaaagttttgctcctatttatttatta
tacggaacagaaccttatcttataaacgaaacgaagcagcttctgatcagcaatgtgcta
agtgaagaagaagctgattttaatttatcctcttatgaccttgaggaaacccccattgat
acagcgcttgaagatgcggagacatttccttttatgggtgaaagaagactgatcttttta
cataacccggtttttttaacgtcagagaaatcgaaagctaaacaggagcataacctggct
aagcttgaagcctatattaaagaacctgctccatattcagtggtggtattttcctcatcg
gcagaaaaactcgatgatcggaaaaaaataaccaaacaattgaaaaaaacggctgcagtc
cttgaagccaagaaattaaatgaaggtgaattgaaagcctggatcagggaaagggcagca
ttaaacggtgtgcagattgatgaatcggctgttgagctgattttgacattggcaggcgcc
aacctgtttattctgaccaacgagatcgataaattagccctatatgcgaatgacacaaag
cggatagatgaacaaatggcagaaaaaatggtatcacggtctttagagcaaaacattttt
tcccttgtggataaggtggttcaccgcaaaatagaagaagccctgagaatttattatgat
ttattaaagcaaaacgaagagccaattaagattttatctgttattacagggcagttcaga
ctgatttatcaggtgaaggagcttgccaggagaggctacggccagcagcagattgccggc
tatttaaagattcatcctttccgggtgaagctggcggccggacaggctcaactgtttgca
gatgaagaactggcagcgatcataagcttgcttgctgatgcggattatcaaatgaaaaca
gggggcatgaataaaaccatgctgattgaaatgttcctgtttcgtctgcaaagtcaggcg
ctcagaaaatag
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